Coexpression cluster: Cluster_302 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 30.85% (29/94) 1.3 3e-06 0.000128
GO:1901363 heterocyclic compound binding 22.34% (21/94) 1.64 2e-06 0.00015
GO:0097159 organic cyclic compound binding 22.34% (21/94) 1.64 2e-06 0.00015
GO:0003674 molecular_function 43.62% (41/94) 0.96 4e-06 0.000152
GO:0003676 nucleic acid binding 14.89% (14/94) 2.23 2e-06 0.000199
GO:0051603 proteolysis involved in protein catabolic process 5.32% (5/94) 4.84 1e-06 0.000243
GO:1901575 organic substance catabolic process 5.32% (5/94) 3.85 2.7e-05 0.000972
GO:0009056 catabolic process 5.32% (5/94) 3.8 3.2e-05 0.001006
GO:0006511 ubiquitin-dependent protein catabolic process 3.19% (3/94) 5.11 9.3e-05 0.001937
GO:0019941 modification-dependent protein catabolic process 3.19% (3/94) 5.11 9.3e-05 0.001937
GO:0043632 modification-dependent macromolecule catabolic process 3.19% (3/94) 5.11 9.3e-05 0.001937
GO:0005575 cellular_component 18.09% (17/94) 1.47 0.000111 0.002138
GO:0005634 nucleus 4.26% (4/94) 4.0 0.00012 0.002145
GO:0019773 proteasome core complex, alpha-subunit complex 2.13% (2/94) 6.82 0.000138 0.002298
GO:0003723 RNA binding 8.51% (8/94) 2.51 8.7e-05 0.002408
GO:0043226 organelle 10.64% (10/94) 2.0 0.000207 0.00305
GO:0043229 intracellular organelle 10.64% (10/94) 2.0 0.000205 0.003205
GO:0044265 cellular macromolecule catabolic process 3.19% (3/94) 4.6 0.000269 0.003734
GO:0044260 cellular macromolecule metabolic process 10.64% (10/94) 1.93 0.000306 0.004024
GO:0009057 macromolecule catabolic process 3.19% (3/94) 4.22 0.000581 0.007261
GO:0032991 protein-containing complex 7.45% (7/94) 2.21 0.000817 0.00928
GO:0044248 cellular catabolic process 3.19% (3/94) 4.07 0.000787 0.009366
GO:0043227 membrane-bounded organelle 4.26% (4/94) 3.22 0.000926 0.009649
GO:0043231 intracellular membrane-bounded organelle 4.26% (4/94) 3.24 0.000898 0.009764
GO:0006334 nucleosome assembly 2.13% (2/94) 4.9 0.002086 0.020056
GO:0034728 nucleosome organization 2.13% (2/94) 4.9 0.002086 0.020056
GO:0071824 protein-DNA complex subunit organization 2.13% (2/94) 4.82 0.002309 0.020616
GO:0065004 protein-DNA complex assembly 2.13% (2/94) 4.82 0.002309 0.020616
GO:0006091 generation of precursor metabolites and energy 3.19% (3/94) 3.48 0.002538 0.021884
GO:0006338 chromatin remodeling 2.13% (2/94) 4.65 0.002914 0.024282
GO:1990837 sequence-specific double-stranded DNA binding 1.06% (1/94) 7.56 0.005295 0.024513
GO:0000976 transcription cis-regulatory region binding 1.06% (1/94) 7.56 0.005295 0.024513
GO:0001067 transcription regulatory region nucleic acid binding 1.06% (1/94) 7.56 0.005295 0.024513
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 1.06% (1/94) 7.56 0.005295 0.024513
GO:0032422 purine-rich negative regulatory element binding 1.06% (1/94) 7.56 0.005295 0.024513
GO:0006757 ATP generation from ADP 2.13% (2/94) 4.29 0.004793 0.024965
GO:0009179 purine ribonucleoside diphosphate metabolic process 2.13% (2/94) 4.29 0.004793 0.024965
GO:0009185 ribonucleoside diphosphate metabolic process 2.13% (2/94) 4.29 0.004793 0.024965
GO:0046031 ADP metabolic process 2.13% (2/94) 4.29 0.004793 0.024965
GO:0006096 glycolytic process 2.13% (2/94) 4.29 0.004793 0.024965
GO:0046939 nucleotide phosphorylation 2.13% (2/94) 4.29 0.004793 0.024965
GO:0003746 translation elongation factor activity 2.13% (2/94) 4.29 0.004793 0.024965
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 2.13% (2/94) 4.29 0.004793 0.024965
GO:0006165 nucleoside diphosphate phosphorylation 2.13% (2/94) 4.29 0.004793 0.024965
GO:0009135 purine nucleoside diphosphate metabolic process 2.13% (2/94) 4.29 0.004793 0.024965
GO:0009132 nucleoside diphosphate metabolic process 2.13% (2/94) 4.29 0.004793 0.024965
GO:0017076 purine nucleotide binding 9.57% (9/94) 1.45 0.005841 0.025178
GO:0005198 structural molecule activity 7.45% (7/94) 1.71 0.005681 0.025359
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 2.13% (2/94) 4.14 0.005806 0.025464
GO:0006807 nitrogen compound metabolic process 14.89% (14/94) 1.09 0.005626 0.025575
GO:0006090 pyruvate metabolic process 2.13% (2/94) 4.24 0.005121 0.026127
GO:0006325 chromatin organization 2.13% (2/94) 4.5 0.003585 0.02636
GO:0005839 proteasome core complex 2.13% (2/94) 4.5 0.003585 0.02636
GO:0008152 metabolic process 18.09% (17/94) 1.02 0.00383 0.027357
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 1.06% (1/94) 8.14 0.003533 0.027601
GO:0034645 cellular macromolecule biosynthetic process 7.45% (7/94) 1.67 0.006747 0.027651
GO:0006508 proteolysis 5.32% (5/94) 2.32 0.003441 0.027747
GO:0051540 metal cluster binding 2.13% (2/94) 4.04 0.006718 0.02799
GO:0051536 iron-sulfur cluster binding 2.13% (2/94) 4.04 0.006718 0.02799
GO:0000166 nucleotide binding 9.57% (9/94) 1.4 0.007129 0.028289
GO:1901265 nucleoside phosphate binding 9.57% (9/94) 1.4 0.007129 0.028289
GO:1901564 organonitrogen compound metabolic process 13.83% (13/94) 1.2 0.004233 0.029393
GO:0044237 cellular metabolic process 13.83% (13/94) 1.09 0.007738 0.030226
GO:0016052 carbohydrate catabolic process 2.13% (2/94) 3.9 0.008096 0.031138
GO:0051287 NAD binding 2.13% (2/94) 4.31 0.004633 0.031306
GO:0071704 organic substance metabolic process 15.96% (15/94) 0.96 0.009327 0.034289
GO:0036094 small molecule binding 9.57% (9/94) 1.34 0.00923 0.034439
GO:0019538 protein metabolic process 11.7% (11/94) 1.18 0.009097 0.034459
GO:0009059 macromolecule biosynthetic process 7.45% (7/94) 1.54 0.010606 0.037879
GO:0051539 4 iron, 4 sulfur cluster binding 1.06% (1/94) 6.56 0.010562 0.038267
GO:0032787 monocarboxylic acid metabolic process 2.13% (2/94) 3.6 0.011919 0.041967
GO:0004645 1,4-alpha-oligoglucan phosphorylase activity 1.06% (1/94) 6.34 0.012311 0.042162
GO:0008184 glycogen phosphorylase activity 1.06% (1/94) 6.34 0.012311 0.042162
GO:0008150 biological_process 21.28% (20/94) 0.75 0.013185 0.044543
GO:0030554 adenyl nucleotide binding 7.45% (7/94) 1.46 0.014239 0.047464
GO:0044238 primary metabolic process 14.89% (14/94) 0.93 0.014742 0.048495
GO:0140535 intracellular protein-containing complex 2.13% (2/94) 3.43 0.015005 0.048718
GO:1902494 catalytic complex 3.19% (3/94) 2.53 0.0155 0.049679
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_182 0.006 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_238 0.005 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_27 0.004 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_113 0.005 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_202 0.006 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_12 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_209 0.007 OrthoFinder output from all 39 species Compare
Abrodictyum obscurum HCCA Cluster_71 0.006 OrthoFinder output from all 39 species Compare
Abrodictyum obscurum HCCA Cluster_379 0.007 OrthoFinder output from all 39 species Compare
Alsophila latebrosa HCCA Cluster_39 0.004 OrthoFinder output from all 39 species Compare
Alsophila latebrosa HCCA Cluster_111 0.004 OrthoFinder output from all 39 species Compare
Alsophila latebrosa HCCA Cluster_270 0.006 OrthoFinder output from all 39 species Compare
Alsophila latebrosa HCCA Cluster_586 0.007 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_169 0.007 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_198 0.005 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_201 0.004 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_241 0.007 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_456 0.004 OrthoFinder output from all 39 species Compare
Angiopteris evecta HCCA Cluster_48 0.005 OrthoFinder output from all 39 species Compare
Davallia denticulata HCCA Cluster_232 0.006 OrthoFinder output from all 39 species Compare
Equisetum hyemale HCCA Cluster_29 0.005 OrthoFinder output from all 39 species Compare
Lindsaea ensifolia HCCA Cluster_332 0.004 OrthoFinder output from all 39 species Compare
Lindsaea ensifolia HCCA Cluster_395 0.006 OrthoFinder output from all 39 species Compare
Lindsaea ensifolia HCCA Cluster_482 0.006 OrthoFinder output from all 39 species Compare
Microlepia speluncae HCCA Cluster_77 0.006 OrthoFinder output from all 39 species Compare
Microlepia speluncae HCCA Cluster_82 0.013 OrthoFinder output from all 39 species Compare
Microlepia speluncae HCCA Cluster_439 0.006 OrthoFinder output from all 39 species Compare
Nephrolepis biserrata HCCA Cluster_243 0.005 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_149 0.006 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_299 0.006 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_301 0.007 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_338 0.007 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_352 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_1 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_21 0.013 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_38 0.006 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_41 0.004 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_48 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_50 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_53 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_56 0.014 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_60 0.006 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_65 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_74 0.017 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_80 0.004 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_81 0.023 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_85 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_86 0.018 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_88 0.013 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_93 0.004 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_102 0.011 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_131 0.006 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_132 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_143 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_167 0.012 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_175 0.006 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_179 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_208 0.009 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_210 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_213 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_214 0.012 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_216 0.021 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_223 0.02 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_226 0.004 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_233 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_240 0.025 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_265 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_274 0.015 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_283 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_296 0.005 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_313 0.006 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_326 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_330 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_331 0.009 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_345 0.003 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_352 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_393 0.013 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_398 0.01 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_404 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_420 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_436 0.013 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_438 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_448 0.021 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_512 0.006 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_517 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_541 0.007 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_577 0.007 OrthoFinder output from all 39 species Compare
Tectaria incisa HCCA Cluster_70 0.005 OrthoFinder output from all 39 species Compare
Pyrrosia piloselloides HCCA Cluster_81 0.005 OrthoFinder output from all 39 species Compare
Pyrrosia piloselloides HCCA Cluster_235 0.004 OrthoFinder output from all 39 species Compare
Ophioglossum reticulatum HCCA Cluster_569 0.005 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_94 0.011 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_113 0.004 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_301 0.004 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_318 0.006 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_320 0.006 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_459 0.005 OrthoFinder output from all 39 species Compare
Stenochlaena palustris HCCA Cluster_499 0.006 OrthoFinder output from all 39 species Compare
Dicranopteris curranii HCCA Cluster_29 0.004 OrthoFinder output from all 39 species Compare
Dicranopteris curranii HCCA Cluster_670 0.015 OrthoFinder output from all 39 species Compare
Alsophila spinulosa HCCA Cluster_123 0.004 OrthoFinder output from all 39 species Compare
Lygodium flexuosum HCCA Cluster_180 0.007 OrthoFinder output from all 39 species Compare
Ceratopteris richardii HCCA Cluster_232 0.007 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_148 0.015 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_171 0.006 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_174 0.003 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_188 0.004 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_204 0.007 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_224 0.006 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_302 0.007 OrthoFinder output from all 39 species Compare
Sequences (94) (download table)

InterPro Domains

GO Terms

Family Terms