Coexpression cluster: Cluster_63 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043603 cellular amide metabolic process 12.12% (8/66) 4.6 0.0 0.0
GO:0006518 peptide metabolic process 12.12% (8/66) 4.7 0.0 0.0
GO:0044444 cytoplasmic part 13.64% (9/66) 4.03 0.0 0.0
GO:0043043 peptide biosynthetic process 10.61% (7/66) 4.6 0.0 0.0
GO:0043604 amide biosynthetic process 10.61% (7/66) 4.51 0.0 0.0
GO:0003735 structural constituent of ribosome 10.61% (7/66) 4.61 0.0 0.0
GO:0043228 non-membrane-bounded organelle 10.61% (7/66) 4.52 0.0 0.0
GO:0005198 structural molecule activity 10.61% (7/66) 4.47 0.0 1e-06
GO:1990904 ribonucleoprotein complex 10.61% (7/66) 4.44 0.0 1e-06
GO:0043232 intracellular non-membrane-bounded organelle 10.61% (7/66) 4.53 0.0 1e-06
GO:0006412 translation 10.61% (7/66) 4.62 0.0 1e-06
GO:0005840 ribosome 10.61% (7/66) 4.64 0.0 1e-06
GO:0044424 intracellular part 16.67% (11/66) 3.11 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 12.12% (8/66) 3.95 0.0 1e-06
GO:0009059 macromolecule biosynthetic process 12.12% (8/66) 3.82 0.0 1e-06
GO:0044464 cell part 16.67% (11/66) 2.96 0.0 2e-06
GO:0044271 cellular nitrogen compound biosynthetic process 12.12% (8/66) 3.61 0.0 3e-06
GO:0043226 organelle 12.12% (8/66) 3.63 0.0 3e-06
GO:0032991 protein-containing complex 13.64% (9/66) 3.31 0.0 3e-06
GO:0043229 intracellular organelle 12.12% (8/66) 3.63 0.0 3e-06
GO:0005622 intracellular 7.58% (5/66) 4.83 1e-06 8e-06
GO:1901566 organonitrogen compound biosynthetic process 10.61% (7/66) 3.47 3e-06 2.6e-05
GO:0034641 cellular nitrogen compound metabolic process 13.64% (9/66) 2.86 4e-06 2.9e-05
GO:0009058 biosynthetic process 13.64% (9/66) 2.8 6e-06 3.9e-05
GO:0044249 cellular biosynthetic process 12.12% (8/66) 2.86 1.4e-05 9.5e-05
GO:0005575 cellular_component 19.7% (13/66) 1.99 1.9e-05 0.00012
GO:1901576 organic substance biosynthetic process 12.12% (8/66) 2.77 2.2e-05 0.000135
GO:0044237 cellular metabolic process 19.7% (13/66) 1.84 5.3e-05 0.00031
GO:0019538 protein metabolic process 15.15% (10/66) 2.14 8.1e-05 0.000459
GO:0044267 cellular protein metabolic process 13.64% (9/66) 2.29 8.6e-05 0.000476
GO:0044260 cellular macromolecule metabolic process 15.15% (10/66) 2.07 0.00012 0.000641
GO:0009987 cellular process 21.21% (14/66) 1.58 0.000184 0.000948
GO:0043170 macromolecule metabolic process 16.67% (11/66) 1.85 0.00021 0.001049
GO:1901564 organonitrogen compound metabolic process 15.15% (10/66) 1.8 0.000533 0.002588
GO:0006807 nitrogen compound metabolic process 16.67% (11/66) 1.68 0.000577 0.002722
GO:0008152 metabolic process 22.73% (15/66) 1.14 0.002569 0.011773
GO:0005759 mitochondrial matrix 1.52% (1/66) 8.07 0.003705 0.016087
GO:0008417 fucosyltransferase activity 1.52% (1/66) 8.07 0.003705 0.016087
GO:0003723 RNA binding 4.55% (3/66) 3.23 0.004125 0.017015
GO:0044238 primary metabolic process 16.67% (11/66) 1.32 0.004051 0.01714
GO:0070013 intracellular organelle lumen 1.52% (1/66) 7.75 0.004629 0.017763
GO:0043233 organelle lumen 1.52% (1/66) 7.75 0.004629 0.017763
GO:0031974 membrane-enclosed lumen 1.52% (1/66) 7.75 0.004629 0.017763
GO:0008097 5S rRNA binding 1.52% (1/66) 7.49 0.005552 0.020821
GO:0071704 organic substance metabolic process 16.67% (11/66) 1.25 0.006004 0.022014
GO:0006465 signal peptide processing 1.52% (1/66) 6.49 0.011074 0.038068
GO:0005787 signal peptidase complex 1.52% (1/66) 6.49 0.011074 0.038068
GO:0008233 peptidase activity 4.55% (3/66) 2.71 0.011013 0.039505
GO:0031163 metallo-sulfur cluster assembly 1.52% (1/66) 6.27 0.012908 0.040959
GO:1905368 peptidase complex 1.52% (1/66) 6.27 0.012908 0.040959
GO:0016226 iron-sulfur cluster assembly 1.52% (1/66) 6.27 0.012908 0.040959
GO:0022607 cellular component assembly 3.03% (2/66) 3.57 0.012405 0.04177
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 1.52% (1/66) 6.17 0.013824 0.043037
GO:0008138 protein tyrosine/serine/threonine phosphatase activity 1.52% (1/66) 5.99 0.015653 0.047829
GO:0016485 protein processing 1.52% (1/66) 5.9 0.016566 0.049699
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_26 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.063 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.037 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.025 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.071 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_194 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.066 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_127 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.047 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_314 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_172 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_239 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_398 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_713 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_12 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_31 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.043 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_160 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_164 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_179 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.048 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_125 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_159 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_204 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_260 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_278 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_297 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_32 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.039 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.041 Gene family Compare
Vitis vinifera HCCA cluster Cluster_186 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_234 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.075 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_175 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_304 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.019 Gene family Compare
Sequences (66) (download table)

InterPro Domains

GO Terms

Family Terms