Coexpression cluster: Cluster_239 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043043 peptide biosynthetic process 20.63% (13/63) 5.56 0.0 0.0
GO:0006518 peptide metabolic process 20.63% (13/63) 5.47 0.0 0.0
GO:0003735 structural constituent of ribosome 20.63% (13/63) 5.57 0.0 0.0
GO:0043604 amide biosynthetic process 20.63% (13/63) 5.47 0.0 0.0
GO:0005198 structural molecule activity 20.63% (13/63) 5.43 0.0 0.0
GO:0044444 cytoplasmic part 23.81% (15/63) 4.84 0.0 0.0
GO:0043228 non-membrane-bounded organelle 20.63% (13/63) 5.48 0.0 0.0
GO:1990904 ribonucleoprotein complex 20.63% (13/63) 5.4 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 20.63% (13/63) 5.49 0.0 0.0
GO:0006412 translation 20.63% (13/63) 5.58 0.0 0.0
GO:0043603 cellular amide metabolic process 20.63% (13/63) 5.37 0.0 0.0
GO:0005840 ribosome 20.63% (13/63) 5.6 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 22.22% (14/63) 4.82 0.0 0.0
GO:0009059 macromolecule biosynthetic process 22.22% (14/63) 4.69 0.0 0.0
GO:0005622 intracellular 15.87% (10/63) 5.89 0.0 0.0
GO:0043226 organelle 22.22% (14/63) 4.5 0.0 0.0
GO:0043229 intracellular organelle 22.22% (14/63) 4.51 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 20.63% (13/63) 4.43 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 20.63% (13/63) 4.38 0.0 0.0
GO:0044464 cell part 25.4% (16/63) 3.57 0.0 0.0
GO:0044424 intracellular part 23.81% (15/63) 3.62 0.0 0.0
GO:0044249 cellular biosynthetic process 22.22% (14/63) 3.73 0.0 0.0
GO:0032991 protein-containing complex 20.63% (13/63) 3.91 0.0 0.0
GO:1901576 organic substance biosynthetic process 22.22% (14/63) 3.65 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 22.22% (14/63) 3.56 0.0 0.0
GO:0009058 biosynthetic process 22.22% (14/63) 3.5 0.0 0.0
GO:0044267 cellular protein metabolic process 22.22% (14/63) 3.0 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 23.81% (15/63) 2.73 0.0 0.0
GO:0005575 cellular_component 26.98% (17/63) 2.44 0.0 0.0
GO:0019538 protein metabolic process 22.22% (14/63) 2.7 0.0 0.0
GO:0043170 macromolecule metabolic process 23.81% (15/63) 2.36 0.0 1e-06
GO:0044237 cellular metabolic process 25.4% (16/63) 2.21 0.0 1e-06
GO:1901564 organonitrogen compound metabolic process 22.22% (14/63) 2.36 0.0 2e-06
GO:0006807 nitrogen compound metabolic process 23.81% (15/63) 2.19 1e-06 3e-06
GO:0009987 cellular process 26.98% (17/63) 1.93 1e-06 6e-06
GO:0071704 organic substance metabolic process 25.4% (16/63) 1.85 5e-06 2.3e-05
GO:0044238 primary metabolic process 23.81% (15/63) 1.84 1.3e-05 5.5e-05
GO:0008152 metabolic process 26.98% (17/63) 1.39 0.000161 0.000682
GO:0008150 biological_process 33.33% (21/63) 1.08 0.00044 0.001818
GO:0001871 pattern binding 3.17% (2/63) 5.56 0.000848 0.003328
GO:0030247 polysaccharide binding 3.17% (2/63) 5.56 0.000848 0.003328
GO:0003674 molecular_function 42.86% (27/63) 0.77 0.001544 0.005918
GO:0018196 peptidyl-asparagine modification 1.59% (1/63) 9.14 0.00177 0.006063
GO:0033617 mitochondrial respiratory chain complex IV assembly 1.59% (1/63) 9.14 0.00177 0.006063
GO:0033108 mitochondrial respiratory chain complex assembly 1.59% (1/63) 9.14 0.00177 0.006063
GO:0008535 respiratory chain complex IV assembly 1.59% (1/63) 9.14 0.00177 0.006063
GO:0018279 protein N-linked glycosylation via asparagine 1.59% (1/63) 9.14 0.00177 0.006063
GO:0003723 RNA binding 4.76% (3/63) 3.3 0.003618 0.012136
GO:0004045 aminoacyl-tRNA hydrolase activity 1.59% (1/63) 7.14 0.007061 0.023201
GO:0030246 carbohydrate binding 3.17% (2/63) 3.86 0.008544 0.027512
GO:0017004 cytochrome complex assembly 1.59% (1/63) 6.68 0.009697 0.030611
GO:0005739 mitochondrion 1.59% (1/63) 6.56 0.010573 0.030951
GO:0003746 translation elongation factor activity 1.59% (1/63) 6.56 0.010573 0.030951
GO:0006414 translational elongation 1.59% (1/63) 6.56 0.010573 0.030951
GO:0003676 nucleic acid binding 9.52% (6/63) 1.7 0.010162 0.031464
GO:0005789 endoplasmic reticulum membrane 1.59% (1/63) 6.33 0.012325 0.035434
GO:0008408 3'-5' exonuclease activity 1.59% (1/63) 6.23 0.0132 0.037283
GO:0003697 single-stranded DNA binding 1.59% (1/63) 6.14 0.014073 0.039066
GO:0006487 protein N-linked glycosylation 1.59% (1/63) 6.05 0.014946 0.040786
GO:0004527 exonuclease activity 1.59% (1/63) 5.89 0.01669 0.044786
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_51 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.121 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_135 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_139 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_154 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_195 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.075 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_235 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.117 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_172 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_181 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.144 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_165 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.081 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.037 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_167 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.041 Gene family Compare
Oryza sativa HCCA cluster Cluster_258 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_323 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_325 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_551 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_5 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_63 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_93 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_203 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_274 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_289 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_341 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_8 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.041 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.053 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_179 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_13 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.115 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_94 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_150 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_193 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_204 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_241 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_26 0.028 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.05 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_132 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_133 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.096 Gene family Compare
Vitis vinifera HCCA cluster Cluster_223 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_46 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.11 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_121 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_145 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_179 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_203 0.083 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_264 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_290 0.017 Gene family Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms