Coexpression cluster: Cluster_284 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043038 amino acid activation 8.2% (5/61) 5.95 0.0 1e-06
GO:0043039 tRNA aminoacylation 8.2% (5/61) 5.95 0.0 1e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 8.2% (5/61) 5.98 0.0 1e-06
GO:0004812 aminoacyl-tRNA ligase activity 8.2% (5/61) 5.98 0.0 1e-06
GO:0006520 cellular amino acid metabolic process 9.84% (6/61) 4.94 0.0 2e-06
GO:0016874 ligase activity 9.84% (6/61) 5.3 0.0 2e-06
GO:0140098 catalytic activity, acting on RNA 11.48% (7/61) 4.13 0.0 4e-06
GO:0140101 catalytic activity, acting on a tRNA 8.2% (5/61) 5.37 0.0 5e-06
GO:0006399 tRNA metabolic process 8.2% (5/61) 5.12 0.0 9e-06
GO:0006418 tRNA aminoacylation for protein translation 6.56% (4/61) 5.86 1e-06 1.6e-05
GO:0034660 ncRNA metabolic process 8.2% (5/61) 4.84 1e-06 1.9e-05
GO:0034641 cellular nitrogen compound metabolic process 16.39% (10/61) 2.76 2e-06 3.7e-05
GO:0006082 organic acid metabolic process 9.84% (6/61) 3.93 3e-06 4.2e-05
GO:0043436 oxoacid metabolic process 9.84% (6/61) 3.93 3e-06 4.5e-05
GO:0019752 carboxylic acid metabolic process 9.84% (6/61) 3.95 3e-06 4.6e-05
GO:0006139 nucleobase-containing compound metabolic process 13.11% (8/61) 3.13 3e-06 4.9e-05
GO:0090304 nucleic acid metabolic process 11.48% (7/61) 3.36 5e-06 7.2e-05
GO:0046483 heterocycle metabolic process 13.11% (8/61) 2.99 7e-06 9.2e-05
GO:0006725 cellular aromatic compound metabolic process 13.11% (8/61) 2.97 8e-06 9.6e-05
GO:1901360 organic cyclic compound metabolic process 13.11% (8/61) 2.93 1e-05 0.000111
GO:0016070 RNA metabolic process 9.84% (6/61) 3.59 1.1e-05 0.000115
GO:1901363 heterocyclic compound binding 31.15% (19/61) 1.54 1.2e-05 0.000122
GO:0097159 organic cyclic compound binding 31.15% (19/61) 1.54 1.2e-05 0.000122
GO:0035639 purine ribonucleoside triphosphate binding 18.03% (11/61) 2.22 2e-05 0.000192
GO:0003676 nucleic acid binding 18.03% (11/61) 2.18 2.5e-05 0.000226
GO:0044281 small molecule metabolic process 9.84% (6/61) 3.32 3.1e-05 0.000267
GO:0000049 tRNA binding 3.28% (2/61) 7.77 3.4e-05 0.000287
GO:0005643 nuclear pore 3.28% (2/61) 6.9 0.000125 0.001009
GO:0043168 anion binding 19.67% (12/61) 1.81 0.00013 0.001013
GO:0036094 small molecule binding 19.67% (12/61) 1.79 0.000143 0.001077
GO:0043167 ion binding 24.59% (15/61) 1.5 0.000174 0.001232
GO:0005488 binding 39.34% (24/61) 1.05 0.000174 0.001266
GO:0032553 ribonucleotide binding 18.03% (11/61) 1.84 0.000211 0.001363
GO:0032555 purine ribonucleotide binding 18.03% (11/61) 1.85 0.0002 0.001373
GO:0097367 carbohydrate derivative binding 18.03% (11/61) 1.83 0.000219 0.001378
GO:0017076 purine nucleotide binding 18.03% (11/61) 1.84 0.000209 0.001391
GO:1901265 nucleoside phosphate binding 18.03% (11/61) 1.73 0.0004 0.002378
GO:0000166 nucleotide binding 18.03% (11/61) 1.73 0.0004 0.002378
GO:0044237 cellular metabolic process 21.31% (13/61) 1.52 0.000454 0.002629
GO:0044428 nuclear part 4.92% (3/61) 4.3 0.000493 0.002784
GO:0003674 molecular_function 52.46% (32/61) 0.7 0.000921 0.005075
GO:0004518 nuclease activity 4.92% (3/61) 3.91 0.001079 0.005805
GO:0005524 ATP binding 13.11% (8/61) 1.93 0.001119 0.005883
GO:0006807 nitrogen compound metabolic process 19.67% (12/61) 1.46 0.001158 0.005946
GO:0006425 glutaminyl-tRNA aminoacylation 1.64% (1/61) 9.36 0.001527 0.007501
GO:0004819 glutamine-tRNA ligase activity 1.64% (1/61) 9.36 0.001527 0.007501
GO:0008144 drug binding 13.11% (8/61) 1.84 0.001673 0.008044
GO:0001882 nucleoside binding 4.92% (3/61) 3.46 0.002588 0.010832
GO:0001883 purine nucleoside binding 4.92% (3/61) 3.47 0.002547 0.010862
GO:0005525 GTP binding 4.92% (3/61) 3.47 0.002547 0.010862
GO:0032561 guanyl ribonucleotide binding 4.92% (3/61) 3.47 0.002547 0.010862
GO:0032549 ribonucleoside binding 4.92% (3/61) 3.47 0.002547 0.010862
GO:0032550 purine ribonucleoside binding 4.92% (3/61) 3.47 0.002547 0.010862
GO:0044424 intracellular part 11.48% (7/61) 1.93 0.002334 0.010989
GO:0009987 cellular process 21.31% (13/61) 1.24 0.002684 0.011028
GO:0019001 guanyl nucleotide binding 4.92% (3/61) 3.42 0.002799 0.011295
GO:0044464 cell part 11.48% (7/61) 1.85 0.003195 0.012668
GO:0005737 cytoplasm 3.28% (2/61) 4.31 0.004618 0.017111
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.64% (1/61) 7.77 0.004573 0.017226
GO:0006528 asparagine metabolic process 1.64% (1/61) 7.77 0.004573 0.017226
GO:0006529 asparagine biosynthetic process 1.64% (1/61) 7.77 0.004573 0.017226
GO:0033044 regulation of chromosome organization 1.64% (1/61) 7.36 0.006093 0.018609
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.64% (1/61) 7.36 0.006093 0.018609
GO:1901990 regulation of mitotic cell cycle phase transition 1.64% (1/61) 7.36 0.006093 0.018609
GO:1901987 regulation of cell cycle phase transition 1.64% (1/61) 7.36 0.006093 0.018609
GO:0051983 regulation of chromosome segregation 1.64% (1/61) 7.36 0.006093 0.018609
GO:0051783 regulation of nuclear division 1.64% (1/61) 7.36 0.006093 0.018609
GO:0033047 regulation of mitotic sister chromatid segregation 1.64% (1/61) 7.36 0.006093 0.018609
GO:0007088 regulation of mitotic nuclear division 1.64% (1/61) 7.36 0.006093 0.018609
GO:0033045 regulation of sister chromatid segregation 1.64% (1/61) 7.36 0.006093 0.018609
GO:0010965 regulation of mitotic sister chromatid separation 1.64% (1/61) 7.36 0.006093 0.018609
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.64% (1/61) 7.36 0.006093 0.018609
GO:1905818 regulation of chromosome separation 1.64% (1/61) 7.36 0.006093 0.018609
GO:0030554 adenyl nucleotide binding 13.11% (8/61) 1.52 0.00646 0.018716
GO:0044238 primary metabolic process 19.67% (12/61) 1.16 0.006387 0.018747
GO:0003723 RNA binding 4.92% (3/61) 3.0 0.006379 0.018971
GO:0032559 adenyl ribonucleotide binding 13.11% (8/61) 1.52 0.006377 0.019217
GO:0010564 regulation of cell cycle process 1.64% (1/61) 7.03 0.007611 0.020236
GO:0005680 anaphase-promoting complex 1.64% (1/61) 7.03 0.007611 0.020236
GO:0031461 cullin-RING ubiquitin ligase complex 1.64% (1/61) 7.03 0.007611 0.020236
GO:0007346 regulation of mitotic cell cycle 1.64% (1/61) 7.03 0.007611 0.020236
GO:0000152 nuclear ubiquitin ligase complex 1.64% (1/61) 7.03 0.007611 0.020236
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.64% (1/61) 7.03 0.007611 0.020236
GO:0006302 double-strand break repair 1.64% (1/61) 7.03 0.007611 0.020236
GO:0043170 macromolecule metabolic process 16.39% (10/61) 1.32 0.006021 0.021948
GO:0071704 organic substance metabolic process 19.67% (12/61) 1.1 0.008582 0.022553
GO:0000151 ubiquitin ligase complex 1.64% (1/61) 6.77 0.009126 0.023437
GO:0017056 structural constituent of nuclear pore 1.64% (1/61) 6.77 0.009126 0.023437
GO:0030145 manganese ion binding 1.64% (1/61) 6.55 0.010639 0.026716
GO:0047429 nucleoside-triphosphate diphosphatase activity 1.64% (1/61) 6.55 0.010639 0.026716
GO:1901564 organonitrogen compound metabolic process 14.75% (9/61) 1.28 0.011216 0.027856
GO:0051169 nuclear transport 1.64% (1/61) 6.36 0.01215 0.029525
GO:0006913 nucleocytoplasmic transport 1.64% (1/61) 6.36 0.01215 0.029525
GO:0044422 organelle part 4.92% (3/61) 2.62 0.013008 0.030944
GO:0044446 intracellular organelle part 4.92% (3/61) 2.62 0.013008 0.030944
GO:0009067 aspartate family amino acid biosynthetic process 1.64% (1/61) 6.19 0.013658 0.032154
GO:0009066 aspartate family amino acid metabolic process 1.64% (1/61) 6.03 0.015164 0.035332
GO:0033043 regulation of organelle organization 1.64% (1/61) 5.9 0.016668 0.038439
GO:0008152 metabolic process 22.95% (14/61) 0.86 0.018719 0.042733
GO:0008408 3'-5' exonuclease activity 1.64% (1/61) 5.65 0.019669 0.044453
GO:0016788 hydrolase activity, acting on ester bonds 4.92% (3/61) 2.37 0.020461 0.045783
GO:0030976 thiamine pyrophosphate binding 1.64% (1/61) 5.55 0.021167 0.046899
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_28 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_66 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.073 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.029 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_229 0.031 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.042 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.022 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_166 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_178 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_187 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.037 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_40 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_98 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_114 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_146 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_165 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_149 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_115 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_209 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_248 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_269 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_374 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_460 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_64 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.044 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_113 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_148 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.032 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_145 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_224 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_277 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.036 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_295 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_303 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_83 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.039 Gene family Compare
Vitis vinifera HCCA cluster Cluster_96 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_189 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_41 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.048 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.07 Gene family Compare
Zea mays HCCA cluster Cluster_132 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_142 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_229 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_239 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_322 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.04 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.023 Gene family Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms