Coexpression cluster: Cluster_202 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006974 cellular response to DNA damage stimulus 7.69% (6/78) 5.5 0.0 0.0
GO:0051716 cellular response to stimulus 7.69% (6/78) 5.5 0.0 0.0
GO:0033554 cellular response to stress 7.69% (6/78) 5.5 0.0 0.0
GO:0006281 DNA repair 7.69% (6/78) 5.57 0.0 1e-06
GO:1901363 heterocyclic compound binding 29.49% (23/78) 1.64 1e-06 1.4e-05
GO:0097159 organic cyclic compound binding 29.49% (23/78) 1.64 1e-06 1.4e-05
GO:0035639 purine ribonucleoside triphosphate binding 17.95% (14/78) 2.18 2e-06 3.3e-05
GO:0003676 nucleic acid binding 16.67% (13/78) 2.35 1e-06 3.4e-05
GO:0090304 nucleic acid metabolic process 11.54% (9/78) 2.98 2e-06 3.7e-05
GO:0006139 nucleobase-containing compound metabolic process 12.82% (10/78) 2.78 2e-06 3.7e-05
GO:0030983 mismatched DNA binding 3.85% (3/78) 6.93 2e-06 4e-05
GO:0006298 mismatch repair 3.85% (3/78) 6.73 3e-06 4.2e-05
GO:0046483 heterocycle metabolic process 12.82% (10/78) 2.67 4e-06 4.7e-05
GO:0005488 binding 38.46% (30/78) 1.19 5e-06 4.8e-05
GO:0034641 cellular nitrogen compound metabolic process 14.1% (11/78) 2.5 4e-06 4.9e-05
GO:0006950 response to stress 7.69% (6/78) 3.81 5e-06 5e-05
GO:0006725 cellular aromatic compound metabolic process 12.82% (10/78) 2.64 4e-06 5.1e-05
GO:1901360 organic cyclic compound metabolic process 12.82% (10/78) 2.61 6e-06 5.4e-05
GO:0017076 purine nucleotide binding 17.95% (14/78) 1.97 1.1e-05 9.8e-05
GO:0032555 purine ribonucleotide binding 17.95% (14/78) 1.97 1.1e-05 0.0001
GO:0032553 ribonucleotide binding 17.95% (14/78) 1.96 1.2e-05 0.000101
GO:0097367 carbohydrate derivative binding 17.95% (14/78) 1.95 1.3e-05 0.000105
GO:0005524 ATP binding 15.38% (12/78) 2.13 1.7e-05 0.000131
GO:0006259 DNA metabolic process 7.69% (6/78) 3.44 2e-05 0.000143
GO:0050896 response to stimulus 7.69% (6/78) 3.37 2.6e-05 0.000182
GO:0000166 nucleotide binding 17.95% (14/78) 1.83 3.2e-05 0.000204
GO:1901265 nucleoside phosphate binding 17.95% (14/78) 1.83 3.2e-05 0.000204
GO:0043168 anion binding 17.95% (14/78) 1.82 3.6e-05 0.000221
GO:0036094 small molecule binding 17.95% (14/78) 1.78 4.9e-05 0.000291
GO:0030554 adenyl nucleotide binding 15.38% (12/78) 1.89 8.4e-05 0.000469
GO:0032559 adenyl ribonucleotide binding 15.38% (12/78) 1.9 8.3e-05 0.000477
GO:0043167 ion binding 24.36% (19/78) 1.3 0.000171 0.000925
GO:0003690 double-stranded DNA binding 3.85% (3/78) 4.73 0.000205 0.001075
GO:0044237 cellular metabolic process 17.95% (14/78) 1.3 0.001405 0.007148
GO:0006396 RNA processing 3.85% (3/78) 3.7 0.001627 0.008041
GO:0006807 nitrogen compound metabolic process 16.67% (13/78) 1.34 0.001698 0.008162
GO:0030915 Smc5-Smc6 complex 1.28% (1/78) 9.05 0.001888 0.008596
GO:0106068 SUMO ligase complex 1.28% (1/78) 9.05 0.001888 0.008596
GO:0043170 macromolecule metabolic process 15.38% (12/78) 1.34 0.002585 0.011468
GO:0005664 nuclear origin of replication recognition complex 1.28% (1/78) 8.05 0.003773 0.016318
GO:0004518 nuclease activity 3.85% (3/78) 3.26 0.003888 0.016404
GO:0003677 DNA binding 6.41% (5/78) 2.16 0.005316 0.021899
GO:0008097 5S rRNA binding 1.28% (1/78) 7.46 0.005654 0.022748
GO:0071704 organic substance metabolic process 17.95% (14/78) 1.05 0.006757 0.025978
GO:0003674 molecular_function 41.03% (32/78) 0.58 0.006699 0.026338
GO:0000808 origin recognition complex 1.28% (1/78) 7.05 0.007532 0.028326
GO:0009086 methionine biosynthetic process 1.28% (1/78) 6.73 0.009406 0.033209
GO:0006302 double-strand break repair 1.28% (1/78) 6.73 0.009406 0.033209
GO:0030145 manganese ion binding 1.28% (1/78) 6.73 0.009406 0.033209
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.28% (1/78) 6.46 0.011277 0.03547
GO:0032040 small-subunit processome 1.28% (1/78) 6.46 0.011277 0.03547
GO:0008172 S-methyltransferase activity 1.28% (1/78) 6.46 0.011277 0.03547
GO:0006555 methionine metabolic process 1.28% (1/78) 6.46 0.011277 0.03547
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.28% (1/78) 6.46 0.011277 0.03547
GO:0044238 primary metabolic process 16.67% (13/78) 1.03 0.010375 0.035899
GO:0008152 metabolic process 17.95% (14/78) 0.95 0.012096 0.037368
GO:0003723 RNA binding 3.85% (3/78) 2.58 0.014085 0.042749
GO:0009987 cellular process 19.23% (15/78) 0.86 0.016354 0.047954
GO:0044260 cellular macromolecule metabolic process 11.54% (9/78) 1.2 0.016282 0.048566
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_179 0.041 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_186 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_191 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_241 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_43 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_42 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_57 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_145 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_336 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_1 0.049 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_25 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_31 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_223 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_319 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_56 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_150 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_229 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_31 0.04 Archaeplastida Compare
Picea abies HCCA Cluster_260 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_276 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_464 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_510 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_73 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_235 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_14 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_68 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_75 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_154 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_184 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_92 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_238 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_247 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.04 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_7 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_43 0.021 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_78 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_81 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_242 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_267 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_336 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_1 0.048 LandPlants Compare
Marchantia polymorpha HCCA Cluster_65 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_84 0.016 LandPlants Compare
Marchantia polymorpha HCCA Cluster_110 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_52 0.024 LandPlants Compare
Oryza sativa HCCA Cluster_210 0.022 LandPlants Compare
Oryza sativa HCCA Cluster_223 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_238 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_325 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_333 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_56 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_173 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_250 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_261 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_275 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_284 0.015 LandPlants Compare
Picea abies HCCA Cluster_31 0.036 LandPlants Compare
Picea abies HCCA Cluster_140 0.017 LandPlants Compare
Picea abies HCCA Cluster_237 0.016 LandPlants Compare
Picea abies HCCA Cluster_260 0.016 LandPlants Compare
Picea abies HCCA Cluster_276 0.02 LandPlants Compare
Picea abies HCCA Cluster_464 0.028 LandPlants Compare
Picea abies HCCA Cluster_510 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_73 0.022 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_168 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_35 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_76 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_119 0.022 LandPlants Compare
Solanum lycopersicum HCCA Cluster_122 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_235 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_14 0.02 LandPlants Compare
Vitis vinifera HCCA Cluster_68 0.021 LandPlants Compare
Vitis vinifera HCCA Cluster_148 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_190 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_213 0.016 LandPlants Compare
Zea mays HCCA Cluster_13 0.016 LandPlants Compare
Zea mays HCCA Cluster_92 0.022 LandPlants Compare
Zea mays HCCA Cluster_224 0.015 LandPlants Compare
Zea mays HCCA Cluster_238 0.024 LandPlants Compare
Zea mays HCCA Cluster_247 0.031 LandPlants Compare
Zea mays HCCA Cluster_358 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_29 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_96 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_148 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_176 0.014 SeedPlants Compare
Amborella trichopoda HCCA Cluster_179 0.039 SeedPlants Compare
Amborella trichopoda HCCA Cluster_211 0.014 SeedPlants Compare
Amborella trichopoda HCCA Cluster_225 0.012 SeedPlants Compare
Amborella trichopoda HCCA Cluster_253 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_7 0.017 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_43 0.016 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_78 0.017 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_81 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_105 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_132 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_139 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_157 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_181 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_211 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_242 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_267 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_336 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_52 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_163 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_173 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_210 0.021 SeedPlants Compare
Oryza sativa HCCA Cluster_223 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_325 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_333 0.015 SeedPlants Compare
Picea abies HCCA Cluster_31 0.035 SeedPlants Compare
Picea abies HCCA Cluster_39 0.013 SeedPlants Compare
Picea abies HCCA Cluster_64 0.012 SeedPlants Compare
Picea abies HCCA Cluster_140 0.017 SeedPlants Compare
Picea abies HCCA Cluster_237 0.016 SeedPlants Compare
Picea abies HCCA Cluster_260 0.016 SeedPlants Compare
Picea abies HCCA Cluster_276 0.016 SeedPlants Compare
Picea abies HCCA Cluster_365 0.012 SeedPlants Compare
Picea abies HCCA Cluster_411 0.013 SeedPlants Compare
Picea abies HCCA Cluster_464 0.028 SeedPlants Compare
Picea abies HCCA Cluster_510 0.02 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_35 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_76 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_119 0.021 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_122 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_142 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_160 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_194 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_204 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_235 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_249 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_264 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_277 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_3 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_14 0.019 SeedPlants Compare
Vitis vinifera HCCA Cluster_68 0.021 SeedPlants Compare
Vitis vinifera HCCA Cluster_148 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_154 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_190 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_213 0.015 SeedPlants Compare
Zea mays HCCA Cluster_13 0.016 SeedPlants Compare
Zea mays HCCA Cluster_47 0.012 SeedPlants Compare
Zea mays HCCA Cluster_92 0.022 SeedPlants Compare
Zea mays HCCA Cluster_224 0.015 SeedPlants Compare
Zea mays HCCA Cluster_238 0.024 SeedPlants Compare
Zea mays HCCA Cluster_247 0.03 SeedPlants Compare
Zea mays HCCA Cluster_255 0.013 SeedPlants Compare
Zea mays HCCA Cluster_339 0.014 SeedPlants Compare
Zea mays HCCA Cluster_358 0.015 SeedPlants Compare
Sequences (78) (download table)

InterPro Domains

GO Terms

Family Terms