Coexpression cluster: Cluster_256 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990904 ribonucleoprotein complex 18.33% (11/60) 4.57 0.0 0.0
GO:0043604 amide biosynthetic process 16.67% (10/60) 4.47 0.0 0.0
GO:0044444 cytoplasmic part 20.0% (12/60) 3.91 0.0 0.0
GO:0005198 structural molecule activity 16.67% (10/60) 4.45 0.0 0.0
GO:0006518 peptide metabolic process 16.67% (10/60) 4.48 0.0 0.0
GO:0043043 peptide biosynthetic process 16.67% (10/60) 4.52 0.0 0.0
GO:0044464 cell part 26.67% (16/60) 3.07 0.0 0.0
GO:0044424 intracellular part 26.67% (16/60) 3.15 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 18.33% (11/60) 4.08 0.0 0.0
GO:0043603 cellular amide metabolic process 16.67% (10/60) 4.41 0.0 0.0
GO:0003735 structural constituent of ribosome 16.67% (10/60) 4.55 0.0 0.0
GO:0032991 protein-containing complex 23.33% (14/60) 3.55 0.0 0.0
GO:0006412 translation 16.67% (10/60) 4.56 0.0 0.0
GO:0009059 macromolecule biosynthetic process 18.33% (11/60) 3.96 0.0 0.0
GO:0043226 organelle 20.0% (12/60) 3.66 0.0 0.0
GO:0043229 intracellular organelle 20.0% (12/60) 3.66 0.0 0.0
GO:0005840 ribosome 15.0% (9/60) 4.44 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 15.0% (9/60) 4.3 0.0 0.0
GO:0043228 non-membrane-bounded organelle 15.0% (9/60) 4.3 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 16.67% (10/60) 3.76 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 16.67% (10/60) 3.58 0.0 0.0
GO:0044249 cellular biosynthetic process 18.33% (11/60) 3.18 0.0 0.0
GO:1901576 organic substance biosynthetic process 18.33% (11/60) 3.11 0.0 0.0
GO:0009058 biosynthetic process 18.33% (11/60) 2.95 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 18.33% (11/60) 2.92 0.0 2e-06
GO:0005575 cellular_component 28.33% (17/60) 2.11 0.0 2e-06
GO:0044391 ribosomal subunit 3.33% (2/60) 8.06 2.2e-05 0.00016
GO:0015934 large ribosomal subunit 3.33% (2/60) 8.06 2.2e-05 0.00016
GO:0003723 RNA binding 8.33% (5/60) 3.76 3.5e-05 0.000246
GO:0044260 cellular macromolecule metabolic process 20.0% (12/60) 1.96 4.5e-05 0.000304
GO:0008536 Ran GTPase binding 3.33% (2/60) 7.38 6.2e-05 0.000404
GO:0044422 organelle part 8.33% (5/60) 3.38 0.000122 0.000748
GO:0044446 intracellular organelle part 8.33% (5/60) 3.38 0.000122 0.000748
GO:0005622 intracellular 6.67% (4/60) 3.91 0.00015 0.000893
GO:0044267 cellular protein metabolic process 16.67% (10/60) 1.99 0.000183 0.001063
GO:0031267 small GTPase binding 3.33% (2/60) 6.06 0.000414 0.002272
GO:0017016 Ras GTPase binding 3.33% (2/60) 6.06 0.000414 0.002272
GO:0043170 macromolecule metabolic process 20.0% (12/60) 1.61 0.00045 0.002405
GO:0051020 GTPase binding 3.33% (2/60) 5.74 0.000651 0.003387
GO:0009987 cellular process 23.33% (14/60) 1.37 0.000734 0.003725
GO:0019538 protein metabolic process 16.67% (10/60) 1.68 0.001004 0.004972
GO:0044237 cellular metabolic process 20.0% (12/60) 1.43 0.001341 0.006482
GO:0006325 chromatin organization 3.33% (2/60) 5.13 0.001506 0.006792
GO:0000313 organellar ribosome 1.67% (1/60) 9.38 0.001502 0.006928
GO:0005761 mitochondrial ribosome 1.67% (1/60) 9.38 0.001502 0.006928
GO:0008135 translation factor activity, RNA binding 3.33% (2/60) 4.89 0.002106 0.009294
GO:0044815 DNA packaging complex 3.33% (2/60) 4.71 0.002697 0.010527
GO:0032993 protein-DNA complex 3.33% (2/60) 4.74 0.002593 0.010529
GO:0000786 nucleosome 3.33% (2/60) 4.74 0.002593 0.010529
GO:0019899 enzyme binding 3.33% (2/60) 4.76 0.002492 0.010539
GO:0071704 organic substance metabolic process 21.67% (13/60) 1.24 0.002665 0.01061
GO:0003676 nucleic acid binding 13.33% (8/60) 1.75 0.002474 0.010684
GO:1901564 organonitrogen compound metabolic process 16.67% (10/60) 1.45 0.003184 0.012194
GO:0006807 nitrogen compound metabolic process 18.33% (11/60) 1.35 0.003283 0.012343
GO:0044427 chromosomal part 3.33% (2/60) 4.21 0.005298 0.019554
GO:0044238 primary metabolic process 20.0% (12/60) 1.18 0.005568 0.020184
GO:0008097 5S rRNA binding 1.67% (1/60) 7.38 0.005993 0.021345
GO:0045901 positive regulation of translational elongation 1.67% (1/60) 7.06 0.007486 0.022682
GO:0032270 positive regulation of cellular protein metabolic process 1.67% (1/60) 7.06 0.007486 0.022682
GO:0045727 positive regulation of translation 1.67% (1/60) 7.06 0.007486 0.022682
GO:0006449 regulation of translational termination 1.67% (1/60) 7.06 0.007486 0.022682
GO:0045905 positive regulation of translational termination 1.67% (1/60) 7.06 0.007486 0.022682
GO:0051247 positive regulation of protein metabolic process 1.67% (1/60) 7.06 0.007486 0.022682
GO:0043243 positive regulation of protein complex disassembly 1.67% (1/60) 7.06 0.007486 0.022682
GO:0006452 translational frameshifting 1.67% (1/60) 7.06 0.007486 0.022682
GO:0034250 positive regulation of cellular amide metabolic process 1.67% (1/60) 7.06 0.007486 0.022682
GO:0006448 regulation of translational elongation 1.67% (1/60) 7.06 0.007486 0.022682
GO:0050660 flavin adenine dinucleotide binding 3.33% (2/60) 3.87 0.008334 0.02488
GO:0005852 eukaryotic translation initiation factor 3 complex 1.67% (1/60) 6.79 0.008977 0.02641
GO:0005634 nucleus 5.0% (3/60) 2.78 0.009547 0.027686
GO:0043022 ribosome binding 1.67% (1/60) 6.57 0.010465 0.029507
GO:0043244 regulation of protein complex disassembly 1.67% (1/60) 6.57 0.010465 0.029507
GO:0009893 positive regulation of metabolic process 1.67% (1/60) 6.38 0.011952 0.030327
GO:0009891 positive regulation of biosynthetic process 1.67% (1/60) 6.38 0.011952 0.030327
GO:0051173 positive regulation of nitrogen compound metabolic process 1.67% (1/60) 6.38 0.011952 0.030327
GO:0010557 positive regulation of macromolecule biosynthetic process 1.67% (1/60) 6.38 0.011952 0.030327
GO:0010604 positive regulation of macromolecule metabolic process 1.67% (1/60) 6.38 0.011952 0.030327
GO:0010628 positive regulation of gene expression 1.67% (1/60) 6.38 0.011952 0.030327
GO:0031325 positive regulation of cellular metabolic process 1.67% (1/60) 6.38 0.011952 0.030327
GO:0031328 positive regulation of cellular biosynthetic process 1.67% (1/60) 6.38 0.011952 0.030327
GO:0043231 intracellular membrane-bounded organelle 5.0% (3/60) 2.62 0.013073 0.032363
GO:0043227 membrane-bounded organelle 5.0% (3/60) 2.62 0.013073 0.032363
GO:0043021 ribonucleoprotein complex binding 1.67% (1/60) 6.21 0.013436 0.032861
GO:0008150 biological_process 31.67% (19/60) 0.73 0.013934 0.033674
GO:0003746 translation elongation factor activity 1.67% (1/60) 6.06 0.014918 0.034807
GO:0006414 translational elongation 1.67% (1/60) 6.06 0.014918 0.034807
GO:0051130 positive regulation of cellular component organization 1.67% (1/60) 6.06 0.014918 0.034807
GO:0008152 metabolic process 23.33% (14/60) 0.88 0.016271 0.037533
GO:0006284 base-excision repair 1.67% (1/60) 5.68 0.01935 0.044135
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_15 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_30 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_59 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_73 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.059 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_151 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_250 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_257 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.032 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_81 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_148 0.025 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_166 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_172 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_192 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.04 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.03 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.024 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_104 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_126 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_160 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.032 Gene family Compare
Oryza sativa HCCA cluster Cluster_145 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_306 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_5 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_76 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_102 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_180 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_407 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.035 Gene family Compare
Picea abies HCCA cluster Cluster_479 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_850 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.026 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_155 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_170 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.05 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_19 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_45 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_85 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_131 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.055 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_282 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_10 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_26 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.031 Gene family Compare
Vitis vinifera HCCA cluster Cluster_69 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_78 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_122 0.032 Gene family Compare
Vitis vinifera HCCA cluster Cluster_127 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_181 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_51 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.038 Gene family Compare
Zea mays HCCA cluster Cluster_75 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_106 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_124 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_131 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.049 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_220 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_243 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_258 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.052 Gene family Compare
Zea mays HCCA cluster Cluster_285 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_288 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_327 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_334 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_376 0.015 Gene family Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms