Coexpression cluster: Cluster_249 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 53.85% (28/52) 4.3 0.0 0.0
GO:0051567 histone H3-K9 methylation 34.62% (18/52) 5.73 0.0 0.0
GO:0061647 histone H3-K9 modification 34.62% (18/52) 5.73 0.0 0.0
GO:0018022 peptidyl-lysine methylation 36.54% (19/52) 5.44 0.0 0.0
GO:0034968 histone lysine methylation 36.54% (19/52) 5.44 0.0 0.0
GO:0006479 protein methylation 36.54% (19/52) 5.12 0.0 0.0
GO:0008213 protein alkylation 36.54% (19/52) 5.12 0.0 0.0
GO:0016571 histone methylation 36.54% (19/52) 5.14 0.0 0.0
GO:0008283 cell proliferation 30.77% (16/52) 5.72 0.0 0.0
GO:0018205 peptidyl-lysine modification 36.54% (19/52) 4.88 0.0 0.0
GO:0016570 histone modification 36.54% (19/52) 4.84 0.0 0.0
GO:0016569 covalent chromatin modification 36.54% (19/52) 4.65 0.0 0.0
GO:0018193 peptidyl-amino acid modification 36.54% (19/52) 4.64 0.0 0.0
GO:0006325 chromatin organization 38.46% (20/52) 4.32 0.0 0.0
GO:0006260 DNA replication 30.77% (16/52) 5.03 0.0 0.0
GO:0032259 methylation 36.54% (19/52) 4.29 0.0 0.0
GO:0043414 macromolecule methylation 36.54% (19/52) 4.29 0.0 0.0
GO:0090304 nucleic acid metabolic process 55.77% (29/52) 2.93 0.0 0.0
GO:0006306 DNA methylation 26.92% (14/52) 5.36 0.0 0.0
GO:0006305 DNA alkylation 26.92% (14/52) 5.36 0.0 0.0
GO:0044728 DNA methylation or demethylation 26.92% (14/52) 5.35 0.0 0.0
GO:0006304 DNA modification 26.92% (14/52) 5.34 0.0 0.0
GO:1903047 mitotic cell cycle process 26.92% (14/52) 5.05 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 57.69% (30/52) 2.59 0.0 0.0
GO:0006342 chromatin silencing 26.92% (14/52) 4.97 0.0 0.0
GO:0016458 gene silencing 28.85% (15/52) 4.7 0.0 0.0
GO:0045814 negative regulation of gene expression, epigenetic 26.92% (14/52) 4.95 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 61.54% (32/52) 2.39 0.0 0.0
GO:0022402 cell cycle process 32.69% (17/52) 4.04 0.0 0.0
GO:0040029 regulation of gene expression, epigenetic 26.92% (14/52) 4.73 0.0 0.0
GO:0046483 heterocycle metabolic process 57.69% (30/52) 2.39 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 61.54% (32/52) 2.22 0.0 0.0
GO:1902410 mitotic cytokinetic process 23.08% (12/52) 5.06 0.0 0.0
GO:0032506 cytokinetic process 23.08% (12/52) 5.06 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 57.69% (30/52) 2.25 0.0 0.0
GO:1903507 negative regulation of nucleic acid-templated transcription 26.92% (14/52) 4.27 0.0 0.0
GO:1902679 negative regulation of RNA biosynthetic process 26.92% (14/52) 4.27 0.0 0.0
GO:0045892 negative regulation of transcription, DNA-templated 26.92% (14/52) 4.27 0.0 0.0
GO:0051253 negative regulation of RNA metabolic process 26.92% (14/52) 4.24 0.0 0.0
GO:0031047 gene silencing by RNA 23.08% (12/52) 4.81 0.0 0.0
GO:0031048 chromatin silencing by small RNA 19.23% (10/52) 5.53 0.0 0.0
GO:0010558 negative regulation of macromolecule biosynthetic process 26.92% (14/52) 4.21 0.0 0.0
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 26.92% (14/52) 4.21 0.0 0.0
GO:0006346 methylation-dependent chromatin silencing 19.23% (10/52) 5.5 0.0 0.0
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 26.92% (14/52) 4.2 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 57.69% (30/52) 2.18 0.0 0.0
GO:0031327 negative regulation of cellular biosynthetic process 26.92% (14/52) 4.18 0.0 0.0
GO:0009890 negative regulation of biosynthetic process 26.92% (14/52) 4.16 0.0 0.0
GO:2000241 regulation of reproductive process 26.92% (14/52) 4.12 0.0 0.0
GO:0000911 cytokinesis by cell plate formation 21.15% (11/52) 4.97 0.0 0.0
GO:0005634 nucleus 84.62% (44/52) 1.32 0.0 0.0
GO:0010629 negative regulation of gene expression 28.85% (15/52) 3.83 0.0 0.0
GO:0009909 regulation of flower development 25.0% (13/52) 4.26 0.0 0.0
GO:0048449 floral organ formation 19.23% (10/52) 5.23 0.0 0.0
GO:0051052 regulation of DNA metabolic process 21.15% (11/52) 4.84 0.0 0.0
GO:0043170 macromolecule metabolic process 63.46% (33/52) 1.89 0.0 0.0
GO:0051172 negative regulation of nitrogen compound metabolic process 26.92% (14/52) 3.97 0.0 0.0
GO:0051726 regulation of cell cycle 23.08% (12/52) 4.45 0.0 0.0
GO:0031324 negative regulation of cellular metabolic process 26.92% (14/52) 3.91 0.0 0.0
GO:0048831 regulation of shoot system development 25.0% (13/52) 4.13 0.0 0.0
GO:0010605 negative regulation of macromolecule metabolic process 28.85% (15/52) 3.66 0.0 0.0
GO:0006807 nitrogen compound metabolic process 65.38% (34/52) 1.74 0.0 0.0
GO:0009892 negative regulation of metabolic process 28.85% (15/52) 3.59 0.0 0.0
GO:0060255 regulation of macromolecule metabolic process 46.15% (24/52) 2.4 0.0 0.0
GO:1905393 plant organ formation 19.23% (10/52) 4.76 0.0 0.0
GO:0006275 regulation of DNA replication 17.31% (9/52) 5.16 0.0 0.0
GO:0050793 regulation of developmental process 30.77% (16/52) 3.27 0.0 0.0
GO:0051171 regulation of nitrogen compound metabolic process 44.23% (23/52) 2.42 0.0 0.0
GO:0016043 cellular component organization 48.08% (25/52) 2.24 0.0 0.0
GO:0048580 regulation of post-embryonic development 25.0% (13/52) 3.83 0.0 0.0
GO:0006261 DNA-dependent DNA replication 19.23% (10/52) 4.7 0.0 0.0
GO:0010564 regulation of cell cycle process 17.31% (9/52) 5.1 0.0 0.0
GO:0044267 cellular protein metabolic process 42.31% (22/52) 2.49 0.0 0.0
GO:0048523 negative regulation of cellular process 28.85% (15/52) 3.4 0.0 0.0
GO:0019219 regulation of nucleobase-containing compound metabolic process 42.31% (22/52) 2.47 0.0 0.0
GO:0006464 cellular protein modification process 38.46% (20/52) 2.66 0.0 0.0
GO:0036211 protein modification process 38.46% (20/52) 2.66 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 34.62% (18/52) 2.89 0.0 0.0
GO:0080090 regulation of primary metabolic process 44.23% (23/52) 2.33 0.0 0.0
GO:0031323 regulation of cellular metabolic process 44.23% (23/52) 2.31 0.0 0.0
GO:2000026 regulation of multicellular organismal development 25.0% (13/52) 3.65 0.0 0.0
GO:0071840 cellular component organization or biogenesis 48.08% (25/52) 2.14 0.0 0.0
GO:0006310 DNA recombination 19.23% (10/52) 4.47 0.0 0.0
GO:0019222 regulation of metabolic process 46.15% (24/52) 2.21 0.0 0.0
GO:0044238 primary metabolic process 67.31% (35/52) 1.51 0.0 0.0
GO:0048519 negative regulation of biological process 32.69% (17/52) 2.91 0.0 0.0
GO:0006270 DNA replication initiation 13.46% (7/52) 5.85 0.0 0.0
GO:0051239 regulation of multicellular organismal process 25.0% (13/52) 3.59 0.0 0.0
GO:2000112 regulation of cellular macromolecule biosynthetic process 40.38% (21/52) 2.41 0.0 0.0
GO:0010556 regulation of macromolecule biosynthetic process 40.38% (21/52) 2.41 0.0 0.0
GO:0009059 macromolecule biosynthetic process 34.62% (18/52) 2.71 0.0 0.0
GO:0031326 regulation of cellular biosynthetic process 40.38% (21/52) 2.37 0.0 0.0
GO:0022414 reproductive process 40.38% (21/52) 2.31 0.0 0.0
GO:0009889 regulation of biosynthetic process 40.38% (21/52) 2.3 0.0 0.0
GO:0019538 protein metabolic process 44.23% (23/52) 2.13 0.0 0.0
GO:0048646 anatomical structure formation involved in morphogenesis 19.23% (10/52) 4.12 0.0 0.0
GO:0050789 regulation of biological process 55.77% (29/52) 1.71 0.0 0.0
GO:0043412 macromolecule modification 38.46% (20/52) 2.37 0.0 0.0
GO:0050794 regulation of cellular process 51.92% (27/52) 1.82 0.0 0.0
GO:0051276 chromosome organization 17.31% (9/52) 4.36 0.0 0.0
GO:0071704 organic substance metabolic process 67.31% (35/52) 1.33 0.0 0.0
GO:0044237 cellular metabolic process 65.38% (34/52) 1.34 0.0 0.0
GO:0016246 RNA interference 11.54% (6/52) 5.52 0.0 0.0
GO:0009987 cellular process 75.0% (39/52) 1.09 0.0 0.0
GO:0035194 posttranscriptional gene silencing by RNA 11.54% (6/52) 5.32 0.0 0.0
GO:0043229 intracellular organelle 96.15% (50/52) 0.63 0.0 0.0
GO:0043226 organelle 96.15% (50/52) 0.63 0.0 0.0
GO:0065007 biological regulation 55.77% (29/52) 1.49 0.0 0.0
GO:0008152 metabolic process 67.31% (35/52) 1.21 0.0 0.0
GO:0017111 nucleoside-triphosphatase activity 21.15% (11/52) 3.28 0.0 0.0
GO:0016441 posttranscriptional gene silencing 11.54% (6/52) 5.17 0.0 0.0
GO:0016462 pyrophosphatase activity 21.15% (11/52) 3.21 0.0 0.0
GO:0044427 chromosomal part 11.54% (6/52) 5.1 0.0 0.0
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 21.15% (11/52) 3.21 0.0 0.0
GO:0010608 posttranscriptional regulation of gene expression 13.46% (7/52) 4.52 0.0 0.0
GO:0016817 hydrolase activity, acting on acid anhydrides 21.15% (11/52) 3.2 0.0 0.0
GO:0051128 regulation of cellular component organization 17.31% (9/52) 3.72 0.0 0.0
GO:0033043 regulation of organelle organization 15.38% (8/52) 4.06 0.0 0.0
GO:0003006 developmental process involved in reproduction 32.69% (17/52) 2.26 0.0 0.0
GO:0007346 regulation of mitotic cell cycle 11.54% (6/52) 4.95 0.0 0.0
GO:0043231 intracellular membrane-bounded organelle 94.23% (49/52) 0.62 0.0 0.0
GO:0043227 membrane-bounded organelle 94.23% (49/52) 0.61 0.0 0.0
GO:0006996 organelle organization 26.92% (14/52) 2.52 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 46.15% (24/52) 1.6 0.0 1e-06
GO:1902749 regulation of cell cycle G2/M phase transition 9.62% (5/52) 5.39 0.0 1e-06
GO:0010389 regulation of G2/M transition of mitotic cell cycle 9.62% (5/52) 5.39 0.0 1e-06
GO:1901987 regulation of cell cycle phase transition 9.62% (5/52) 5.3 0.0 1e-06
GO:1901990 regulation of mitotic cell cycle phase transition 9.62% (5/52) 5.3 0.0 1e-06
GO:0010468 regulation of gene expression 32.69% (17/52) 2.02 0.0 2e-06
GO:1903046 meiotic cell cycle process 13.46% (7/52) 3.92 0.0 2e-06
GO:0007129 synapsis 9.62% (5/52) 5.02 0.0 3e-06
GO:0070192 chromosome organization involved in meiotic cell cycle 9.62% (5/52) 4.97 1e-06 3e-06
GO:0044424 intracellular part 98.08% (51/52) 0.45 1e-06 4e-06
GO:0006974 cellular response to DNA damage stimulus 13.46% (7/52) 3.64 1e-06 8e-06
GO:0006302 double-strand break repair 9.62% (5/52) 4.66 2e-06 1e-05
GO:2001141 regulation of RNA biosynthetic process 28.85% (15/52) 2.01 2e-06 1.3e-05
GO:1903506 regulation of nucleic acid-templated transcription 28.85% (15/52) 2.01 2e-06 1.3e-05
GO:0006355 regulation of transcription, DNA-templated 28.85% (15/52) 2.01 2e-06 1.3e-05
GO:0032502 developmental process 38.46% (20/52) 1.6 2e-06 1.3e-05
GO:0051252 regulation of RNA metabolic process 28.85% (15/52) 2.0 3e-06 1.4e-05
GO:0044464 cell part 100.0% (52/52) 0.34 4e-06 2.4e-05
GO:0006312 mitotic recombination 7.69% (4/52) 5.21 4e-06 2.4e-05
GO:0007131 reciprocal meiotic recombination 9.62% (5/52) 4.26 6e-06 3.5e-05
GO:0009560 embryo sac egg cell differentiation 9.62% (5/52) 4.25 6e-06 3.6e-05
GO:0035825 homologous recombination 9.62% (5/52) 4.25 6e-06 3.6e-05
GO:0000725 recombinational repair 7.69% (4/52) 5.0 8e-06 4.1e-05
GO:0000724 double-strand break repair via homologous recombination 7.69% (4/52) 5.0 8e-06 4.1e-05
GO:0033044 regulation of chromosome organization 9.62% (5/52) 4.2 8e-06 4.1e-05
GO:0006281 DNA repair 11.54% (6/52) 3.67 8e-06 4.2e-05
GO:0005663 DNA replication factor C complex 3.85% (2/52) 8.46 1.1e-05 5.6e-05
GO:0044428 nuclear part 15.38% (8/52) 2.87 1.2e-05 6.5e-05
GO:0044249 cellular biosynthetic process 36.54% (19/52) 1.46 1.9e-05 0.000101
GO:0022412 cellular process involved in reproduction in multicellular organism 9.62% (5/52) 3.82 2.8e-05 0.000146
GO:0008094 DNA-dependent ATPase activity 5.77% (3/52) 5.54 3.7e-05 0.000191
GO:0010267 production of ta-siRNAs involved in RNA interference 7.69% (4/52) 4.25 6e-05 0.000305
GO:0044454 nuclear chromosome part 5.77% (3/52) 5.27 6.5e-05 0.000333
GO:1901576 organic substance biosynthetic process 36.54% (19/52) 1.33 6.7e-05 0.00034
GO:0000226 microtubule cytoskeleton organization 9.62% (5/52) 3.47 8.9e-05 0.000445
GO:0032991 protein-containing complex 21.15% (11/52) 1.95 9.4e-05 0.00047
GO:0009058 biosynthetic process 36.54% (19/52) 1.29 0.000101 0.000503
GO:0035196 production of miRNAs involved in gene silencing by miRNA 7.69% (4/52) 4.04 0.000104 0.000511
GO:0007059 chromosome segregation 7.69% (4/52) 4.03 0.000107 0.000524
GO:0007017 microtubule-based process 9.62% (5/52) 3.36 0.000127 0.000615
GO:0040020 regulation of meiotic nuclear division 3.85% (2/52) 6.87 0.000126 0.000615
GO:0035639 purine ribonucleoside triphosphate binding 13.46% (7/52) 2.63 0.000129 0.000622
GO:0043247 telomere maintenance in response to DNA damage 5.77% (3/52) 4.93 0.000134 0.000639
GO:2000242 negative regulation of reproductive process 5.77% (3/52) 4.9 0.000142 0.000673
GO:0030422 production of siRNA involved in RNA interference 7.69% (4/52) 3.91 0.000146 0.000688
GO:0017076 purine nucleotide binding 13.46% (7/52) 2.6 0.000148 0.000689
GO:0032555 purine ribonucleotide binding 13.46% (7/52) 2.6 0.000146 0.00069
GO:0032204 regulation of telomere maintenance 5.77% (3/52) 4.87 0.00015 0.000695
GO:0032553 ribonucleotide binding 13.46% (7/52) 2.58 0.000155 0.000716
GO:0031050 dsRNA fragmentation 7.69% (4/52) 3.88 0.000159 0.000725
GO:0070918 production of small RNA involved in gene silencing by RNA 7.69% (4/52) 3.88 0.000159 0.000725
GO:0097367 carbohydrate derivative binding 13.46% (7/52) 2.56 0.000171 0.000777
GO:0005524 ATP binding 11.54% (6/52) 2.84 0.000184 0.000828
GO:0051607 defense response to virus 7.69% (4/52) 3.82 0.000186 0.000835
GO:0051445 regulation of meiotic cell cycle 3.85% (2/52) 6.58 0.000192 0.000858
GO:0030554 adenyl nucleotide binding 11.54% (6/52) 2.8 0.000212 0.000936
GO:0032559 adenyl ribonucleotide binding 11.54% (6/52) 2.8 0.000212 0.000936
GO:0032200 telomere organization 5.77% (3/52) 4.67 0.000226 0.000985
GO:0000723 telomere maintenance 5.77% (3/52) 4.67 0.000226 0.000985
GO:0000228 nuclear chromosome 3.85% (2/52) 6.46 0.000231 0.001001
GO:0060249 anatomical structure homeostasis 5.77% (3/52) 4.65 0.000237 0.001021
GO:0016787 hydrolase activity 25.0% (13/52) 1.58 0.000265 0.001137
GO:0003777 microtubule motor activity 5.77% (3/52) 4.58 0.000272 0.00116
GO:0048453 sepal formation 5.77% (3/52) 4.46 0.000351 0.001483
GO:0048451 petal formation 5.77% (3/52) 4.46 0.000351 0.001483
GO:0009615 response to virus 7.69% (4/52) 3.56 0.000366 0.001523
GO:0003887 DNA-directed DNA polymerase activity 3.85% (2/52) 6.13 0.000366 0.001528
GO:0051783 regulation of nuclear division 3.85% (2/52) 6.13 0.000366 0.001528
GO:0010332 response to gamma radiation 5.77% (3/52) 4.4 0.000396 0.001638
GO:0003774 motor activity 5.77% (3/52) 4.23 0.000552 0.002272
GO:0007010 cytoskeleton organization 9.62% (5/52) 2.86 0.000621 0.002541
GO:0043168 anion binding 13.46% (7/52) 2.24 0.00065 0.002646
GO:0140097 catalytic activity, acting on DNA 5.77% (3/52) 4.13 0.000675 0.002736
GO:0034061 DNA polymerase activity 3.85% (2/52) 5.65 0.000726 0.002925
GO:0010212 response to ionizing radiation 5.77% (3/52) 4.09 0.000743 0.00298
GO:0061982 meiosis I cell cycle process 5.77% (3/52) 3.94 0.000999 0.003987
GO:0000166 nucleotide binding 13.46% (7/52) 2.13 0.001024 0.004045
GO:1901265 nucleoside phosphate binding 13.46% (7/52) 2.13 0.001024 0.004045
GO:0045132 meiotic chromosome segregation 5.77% (3/52) 3.86 0.001177 0.004625
GO:0098813 nuclear chromosome segregation 5.77% (3/52) 3.84 0.001208 0.004725
GO:0016887 ATPase activity 9.62% (5/52) 2.64 0.00123 0.004786
GO:0032270 positive regulation of cellular protein metabolic process 3.85% (2/52) 5.23 0.001295 0.005017
GO:1990234 transferase complex 7.69% (4/52) 3.05 0.00138 0.00532
GO:0044446 intracellular organelle part 26.92% (14/52) 1.25 0.001521 0.005835
GO:0044422 organelle part 26.92% (14/52) 1.24 0.001555 0.005934
GO:0051247 positive regulation of protein metabolic process 3.85% (2/52) 5.09 0.001588 0.006032
GO:0048869 cellular developmental process 15.38% (8/52) 1.83 0.001679 0.006348
GO:0045005 DNA-dependent DNA replication maintenance of fidelity 1.92% (1/52) 9.04 0.001899 0.006556
GO:0006269 DNA replication, synthesis of RNA primer 1.92% (1/52) 9.04 0.001899 0.006556
GO:0000406 double-strand/single-strand DNA junction binding 1.92% (1/52) 9.04 0.001899 0.006556
GO:0006311 meiotic gene conversion 1.92% (1/52) 9.04 0.001899 0.006556
GO:0005658 alpha DNA polymerase:primase complex 1.92% (1/52) 9.04 0.001899 0.006556
GO:0045004 DNA replication proofreading 1.92% (1/52) 9.04 0.001899 0.006556
GO:0043625 delta DNA polymerase complex 1.92% (1/52) 9.04 0.001899 0.006556
GO:0043137 DNA replication, removal of RNA primer 1.92% (1/52) 9.04 0.001899 0.006556
GO:0008296 3'-5'-exodeoxyribonuclease activity 1.92% (1/52) 9.04 0.001899 0.006556
GO:0006297 nucleotide-excision repair, DNA gap filling 1.92% (1/52) 9.04 0.001899 0.006556
GO:0000403 Y-form DNA binding 1.92% (1/52) 9.04 0.001899 0.006556
GO:0006287 base-excision repair, gap-filling 1.92% (1/52) 9.04 0.001899 0.006556
GO:0035822 gene conversion 1.92% (1/52) 9.04 0.001899 0.006556
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 1.92% (1/52) 9.04 0.001899 0.006556
GO:0032302 MutSbeta complex 1.92% (1/52) 9.04 0.001899 0.006556
GO:0004529 exodeoxyribonuclease activity 1.92% (1/52) 9.04 0.001899 0.006556
GO:0000012 single strand break repair 1.92% (1/52) 9.04 0.001899 0.006556
GO:0007113 endomitotic cell cycle 1.92% (1/52) 9.04 0.001899 0.006556
GO:0032153 cell division site 1.92% (1/52) 9.04 0.001899 0.006556
GO:0002252 immune effector process 7.69% (4/52) 2.94 0.001845 0.006944
GO:0008144 drug binding 11.54% (6/52) 2.14 0.002341 0.008045
GO:0022603 regulation of anatomical structure morphogenesis 5.77% (3/52) 3.48 0.002506 0.008539
GO:0007062 sister chromatid cohesion 5.77% (3/52) 3.48 0.002506 0.008539
GO:0006950 response to stress 28.85% (15/52) 1.11 0.002622 0.008898
GO:0061695 transferase complex, transferring phosphorus-containing groups 3.85% (2/52) 4.65 0.002901 0.009802
GO:0005694 chromosome 3.85% (2/52) 4.61 0.003039 0.010224
GO:0030154 cell differentiation 9.62% (5/52) 2.33 0.003147 0.010543
GO:0009910 negative regulation of flower development 3.85% (2/52) 4.55 0.003324 0.011088
GO:0000086 G2/M transition of mitotic cell cycle 1.92% (1/52) 8.04 0.003795 0.011678
GO:0010069 zygote asymmetric cytokinesis in embryo sac 1.92% (1/52) 8.04 0.003795 0.011678
GO:0051447 negative regulation of meiotic cell cycle 1.92% (1/52) 8.04 0.003795 0.011678
GO:0110029 negative regulation of meiosis I 1.92% (1/52) 8.04 0.003795 0.011678
GO:0000281 mitotic cytokinesis 1.92% (1/52) 8.04 0.003795 0.011678
GO:0000076 DNA replication checkpoint 1.92% (1/52) 8.04 0.003795 0.011678
GO:0000796 condensin complex 1.92% (1/52) 8.04 0.003795 0.011678
GO:0010520 regulation of reciprocal meiotic recombination 1.92% (1/52) 8.04 0.003795 0.011678
GO:0044839 cell cycle G2/M phase transition 1.92% (1/52) 8.04 0.003795 0.011678
GO:0060631 regulation of meiosis I 1.92% (1/52) 8.04 0.003795 0.011678
GO:0045835 negative regulation of meiotic nuclear division 1.92% (1/52) 8.04 0.003795 0.011678
GO:0000404 heteroduplex DNA loop binding 1.92% (1/52) 8.04 0.003795 0.011678
GO:0006271 DNA strand elongation involved in DNA replication 1.92% (1/52) 8.04 0.003795 0.011678
GO:0061085 regulation of histone H3-K27 methylation 1.92% (1/52) 8.04 0.003795 0.011678
GO:0051571 positive regulation of histone H3-K4 methylation 1.92% (1/52) 8.04 0.003795 0.011678
GO:0045128 negative regulation of reciprocal meiotic recombination 1.92% (1/52) 8.04 0.003795 0.011678
GO:0051569 regulation of histone H3-K4 methylation 1.92% (1/52) 8.04 0.003795 0.011678
GO:0022616 DNA strand elongation 1.92% (1/52) 8.04 0.003795 0.011678
GO:0061087 positive regulation of histone H3-K27 methylation 1.92% (1/52) 8.04 0.003795 0.011678
GO:0005488 binding 38.46% (20/52) 0.84 0.004075 0.012494
GO:0045786 negative regulation of cell cycle 3.85% (2/52) 4.46 0.003773 0.012535
GO:0033554 cellular response to stress 13.46% (7/52) 1.75 0.004418 0.013491
GO:0036094 small molecule binding 13.46% (7/52) 1.73 0.00478 0.014542
GO:0043167 ion binding 17.31% (9/52) 1.45 0.005011 0.015185
GO:0006333 chromatin assembly or disassembly 3.85% (2/52) 4.18 0.005463 0.016492
GO:0010424 DNA methylation on cytosine within a CG sequence 1.92% (1/52) 7.46 0.005687 0.016911
GO:0004774 succinate-CoA ligase activity 1.92% (1/52) 7.46 0.005687 0.016911
GO:0004776 succinate-CoA ligase (GDP-forming) activity 1.92% (1/52) 7.46 0.005687 0.016911
GO:0010070 zygote asymmetric cell division 1.92% (1/52) 7.46 0.005687 0.016911
GO:0016572 histone phosphorylation 3.85% (2/52) 4.11 0.006026 0.017852
GO:0000280 nuclear division 3.85% (2/52) 4.09 0.006219 0.018289
GO:0005515 protein binding 19.23% (10/52) 1.3 0.006216 0.018349
GO:0007020 microtubule nucleation 3.85% (2/52) 4.0 0.00702 0.020569
GO:0032137 guanine/thymine mispair binding 1.92% (1/52) 7.04 0.007575 0.021178
GO:0000731 DNA synthesis involved in DNA repair 1.92% (1/52) 7.04 0.007575 0.021178
GO:0061640 cytoskeleton-dependent cytokinesis 1.92% (1/52) 7.04 0.007575 0.021178
GO:0003909 DNA ligase activity 1.92% (1/52) 7.04 0.007575 0.021178
GO:0003910 DNA ligase (ATP) activity 1.92% (1/52) 7.04 0.007575 0.021178
GO:0048572 short-day photoperiodism 1.92% (1/52) 7.04 0.007575 0.021178
GO:0048575 short-day photoperiodism, flowering 1.92% (1/52) 7.04 0.007575 0.021178
GO:0000910 cytokinesis 1.92% (1/52) 7.04 0.007575 0.021178
GO:0000400 four-way junction DNA binding 1.92% (1/52) 7.04 0.007575 0.021178
GO:0042575 DNA polymerase complex 1.92% (1/52) 7.04 0.007575 0.021178
GO:0031570 DNA integrity checkpoint 1.92% (1/52) 7.04 0.007575 0.021178
GO:0032301 MutSalpha complex 1.92% (1/52) 7.04 0.007575 0.021178
GO:0032138 single base insertion or deletion binding 1.92% (1/52) 7.04 0.007575 0.021178
GO:0051716 cellular response to stimulus 13.46% (7/52) 1.6 0.007782 0.02168
GO:0008150 biological_process 90.38% (47/52) 0.25 0.007892 0.021909
GO:0005575 cellular_component 100.0% (52/52) 0.13 0.008198 0.022681
GO:0032135 DNA insertion or deletion binding 1.92% (1/52) 6.72 0.00946 0.025636
GO:0031109 microtubule polymerization or depolymerization 1.92% (1/52) 6.72 0.00946 0.025636
GO:0000217 DNA secondary structure binding 1.92% (1/52) 6.72 0.00946 0.025636
GO:0043570 maintenance of DNA repeat elements 1.92% (1/52) 6.72 0.00946 0.025636
GO:0006266 DNA ligation 1.92% (1/52) 6.72 0.00946 0.025636
GO:0046785 microtubule polymerization 1.92% (1/52) 6.72 0.00946 0.025636
GO:0043228 non-membrane-bounded organelle 9.62% (5/52) 1.93 0.009752 0.02616
GO:0043232 intracellular non-membrane-bounded organelle 9.62% (5/52) 1.93 0.009752 0.02616
GO:0003824 catalytic activity 40.38% (21/52) 0.7 0.009703 0.026204
GO:0002376 immune system process 9.62% (5/52) 1.93 0.009925 0.026533
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis 1.92% (1/52) 6.46 0.011341 0.029237
GO:0032776 DNA methylation on cytosine 1.92% (1/52) 6.46 0.011341 0.029237
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis 1.92% (1/52) 6.46 0.011341 0.029237
GO:0000914 phragmoplast assembly 1.92% (1/52) 6.46 0.011341 0.029237
GO:0006290 pyrimidine dimer repair 1.92% (1/52) 6.46 0.011341 0.029237
GO:0016886 ligase activity, forming phosphoric ester bonds 1.92% (1/52) 6.46 0.011341 0.029237
GO:0031062 positive regulation of histone methylation 1.92% (1/52) 6.46 0.011341 0.029237
GO:0031058 positive regulation of histone modification 1.92% (1/52) 6.46 0.011341 0.029237
GO:0044770 cell cycle phase transition 1.92% (1/52) 6.46 0.011341 0.029237
GO:0007088 regulation of mitotic nuclear division 1.92% (1/52) 6.46 0.011341 0.029237
GO:0044772 mitotic cell cycle phase transition 1.92% (1/52) 6.46 0.011341 0.029237
GO:0048581 negative regulation of post-embryonic development 3.85% (2/52) 3.63 0.011419 0.029343
GO:0045910 negative regulation of DNA recombination 1.92% (1/52) 6.23 0.013219 0.033534
GO:0051784 negative regulation of nuclear division 1.92% (1/52) 6.23 0.013219 0.033534
GO:0000018 regulation of DNA recombination 1.92% (1/52) 6.23 0.013219 0.033534
GO:0000794 condensed nuclear chromosome 1.92% (1/52) 6.23 0.013219 0.033534
GO:0042138 meiotic DNA double-strand break formation 3.85% (2/52) 3.52 0.013277 0.033574
GO:0048285 organelle fission 3.85% (2/52) 3.49 0.013831 0.034862
GO:0009933 meristem structural organization 3.85% (2/52) 3.47 0.014111 0.035457
GO:0051241 negative regulation of multicellular organismal process 3.85% (2/52) 3.46 0.014394 0.036054
GO:0051510 regulation of unidimensional cell growth 3.85% (2/52) 3.44 0.014679 0.036653
GO:0000710 meiotic mismatch repair 1.92% (1/52) 6.04 0.015094 0.037451
GO:0010216 maintenance of DNA methylation 1.92% (1/52) 6.04 0.015094 0.037451
GO:0051301 cell division 3.85% (2/52) 3.41 0.015258 0.03774
GO:0006396 RNA processing 9.62% (5/52) 1.76 0.01589 0.039062
GO:0048532 anatomical structure arrangement 3.85% (2/52) 3.38 0.015845 0.039072
GO:0022604 regulation of cell morphogenesis 3.85% (2/52) 3.37 0.016143 0.03956
GO:0031060 regulation of histone methylation 1.92% (1/52) 5.87 0.016965 0.040329
GO:0006268 DNA unwinding involved in DNA replication 1.92% (1/52) 5.87 0.016965 0.040329
GO:0005677 chromatin silencing complex 1.92% (1/52) 5.87 0.016965 0.040329
GO:0031401 positive regulation of protein modification process 1.92% (1/52) 5.87 0.016965 0.040329
GO:0017053 transcriptional repressor complex 1.92% (1/52) 5.87 0.016965 0.040329
GO:1905269 positive regulation of chromatin organization 1.92% (1/52) 5.87 0.016965 0.040329
GO:0004536 deoxyribonuclease activity 1.92% (1/52) 5.87 0.016965 0.040329
GO:0090568 nuclear transcriptional repressor complex 1.92% (1/52) 5.87 0.016965 0.040329
GO:0051093 negative regulation of developmental process 3.85% (2/52) 3.33 0.017049 0.04041
GO:1902494 catalytic complex 7.69% (4/52) 2.03 0.016656 0.040692
GO:0022627 cytosolic small ribosomal subunit 3.85% (2/52) 3.34 0.016745 0.040784
GO:0042023 DNA endoreduplication 3.85% (2/52) 3.27 0.018292 0.043225
GO:0044786 cell cycle DNA replication 3.85% (2/52) 3.26 0.018608 0.043842
GO:0071897 DNA biosynthetic process 1.92% (1/52) 5.72 0.018832 0.043979
GO:0030983 mismatched DNA binding 1.92% (1/52) 5.72 0.018832 0.043979
GO:0032300 mismatch repair complex 1.92% (1/52) 5.72 0.018832 0.043979
GO:0008565 protein transporter activity 3.85% (2/52) 3.25 0.018927 0.04407
GO:0001558 regulation of cell growth 3.85% (2/52) 3.23 0.019248 0.044686
GO:0004034 aldose 1-epimerase activity 1.92% (1/52) 5.58 0.020696 0.047357
GO:1990391 DNA repair complex 1.92% (1/52) 5.58 0.020696 0.047357
GO:0000075 cell cycle checkpoint 1.92% (1/52) 5.58 0.020696 0.047357
GO:0000793 condensed chromosome 1.92% (1/52) 5.58 0.020696 0.047357
GO:2001252 positive regulation of chromosome organization 1.92% (1/52) 5.58 0.020696 0.047357
GO:0042623 ATPase activity, coupled 5.77% (3/52) 2.34 0.021471 0.048989
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_15 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_56 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_82 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_84 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_124 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_135 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_199 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_226 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_40 0.024 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_49 0.034 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_109 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_156 0.025 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_165 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_7 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_25 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_75 0.058 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_95 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_137 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_160 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_28 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_78 0.046 Gene family Compare
Oryza sativa HCCA cluster Cluster_94 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_121 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.037 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_151 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_224 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_237 0.036 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_7 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_27 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_87 0.057 Gene family Compare
Picea abies HCCA cluster Cluster_112 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_118 0.044 Gene family Compare
Picea abies HCCA cluster Cluster_200 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_288 0.045 Gene family Compare
Picea abies HCCA cluster Cluster_300 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_362 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_375 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_384 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_407 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_475 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_30 0.024 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_70 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_120 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_191 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.044 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.085 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.046 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_142 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_147 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.034 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_212 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_232 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_244 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_274 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.074 Gene family Compare
Vitis vinifera HCCA cluster Cluster_92 0.044 Gene family Compare
Vitis vinifera HCCA cluster Cluster_128 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_147 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_158 0.05 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_15 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.103 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_168 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.067 Gene family Compare
Zea mays HCCA cluster Cluster_196 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_211 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_260 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_275 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_328 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_353 0.02 Gene family Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms