Coexpression cluster: Cluster_66 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 14.93% (10/67) 7.46 0.0 0.0
GO:0015979 photosynthesis 14.93% (10/67) 7.34 0.0 0.0
GO:0098796 membrane protein complex 17.91% (12/67) 5.91 0.0 0.0
GO:0009522 photosystem I 7.46% (5/67) 8.27 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 7.46% (5/67) 8.13 0.0 0.0
GO:0032991 protein-containing complex 17.91% (12/67) 4.09 0.0 0.0
GO:0009538 photosystem I reaction center 5.97% (4/67) 9.27 0.0 0.0
GO:1990204 oxidoreductase complex 7.46% (5/67) 8.01 0.0 0.0
GO:0009523 photosystem II 7.46% (5/67) 7.78 0.0 0.0
GO:0019898 extrinsic component of membrane 4.48% (3/67) 7.85 0.0 4e-06
GO:1902494 catalytic complex 7.46% (5/67) 5.1 0.0 6e-06
GO:0005575 cellular_component 20.9% (14/67) 1.97 1e-05 0.000132
GO:0015108 chloride transmembrane transporter activity 2.99% (2/67) 6.95 0.000116 0.000948
GO:0022832 voltage-gated channel activity 2.99% (2/67) 6.95 0.000116 0.000948
GO:0006821 chloride transport 2.99% (2/67) 6.95 0.000116 0.000948
GO:0008308 voltage-gated anion channel activity 2.99% (2/67) 6.95 0.000116 0.000948
GO:0005253 anion channel activity 2.99% (2/67) 6.95 0.000116 0.000948
GO:0005247 voltage-gated chloride channel activity 2.99% (2/67) 6.95 0.000116 0.000948
GO:0005244 voltage-gated ion channel activity 2.99% (2/67) 6.95 0.000116 0.000948
GO:0005254 chloride channel activity 2.99% (2/67) 6.95 0.000116 0.000948
GO:0022836 gated channel activity 2.99% (2/67) 5.51 0.000886 0.00692
GO:0044237 cellular metabolic process 19.4% (13/67) 1.41 0.000975 0.007267
GO:0015103 inorganic anion transmembrane transporter activity 2.99% (2/67) 5.41 0.001023 0.007293
GO:0034357 photosynthetic membrane 1.49% (1/67) 9.27 0.001622 0.00806
GO:0042549 photosystem II stabilization 1.49% (1/67) 9.27 0.001622 0.00806
GO:0042651 thylakoid membrane 1.49% (1/67) 9.27 0.001622 0.00806
GO:0010109 regulation of photosynthesis 1.49% (1/67) 9.27 0.001622 0.00806
GO:0042548 regulation of photosynthesis, light reaction 1.49% (1/67) 9.27 0.001622 0.00806
GO:0010242 oxygen evolving activity 1.49% (1/67) 9.27 0.001622 0.00806
GO:0043467 regulation of generation of precursor metabolites and energy 1.49% (1/67) 9.27 0.001622 0.00806
GO:0005509 calcium ion binding 4.48% (3/67) 3.84 0.001232 0.008416
GO:0008509 anion transmembrane transporter activity 2.99% (2/67) 5.02 0.001754 0.008462
GO:0015698 inorganic anion transport 2.99% (2/67) 5.14 0.001489 0.009395
GO:0009987 cellular process 23.88% (16/67) 1.17 0.001451 0.009521
GO:0005216 ion channel activity 2.99% (2/67) 4.51 0.003512 0.016456
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.48% (3/67) 3.19 0.004385 0.019976
GO:0010207 photosystem II assembly 1.49% (1/67) 7.68 0.004858 0.021533
GO:0015075 ion transmembrane transporter activity 4.48% (3/67) 3.05 0.005767 0.02489
GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity 1.49% (1/67) 6.95 0.008084 0.032335
GO:0030145 manganese ion binding 1.49% (1/67) 6.95 0.008084 0.032335
GO:0008152 metabolic process 19.4% (13/67) 1.06 0.008024 0.03374
GO:0022803 passive transmembrane transporter activity 2.99% (2/67) 3.62 0.01158 0.044167
GO:0015267 channel activity 2.99% (2/67) 3.62 0.01158 0.044167
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_42 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_125 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_216 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.068 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_142 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_89 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_99 0.111 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_11 0.111 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.053 Archaeplastida Compare
Oryza sativa HCCA Cluster_247 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_287 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.092 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_307 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_180 0.066 Archaeplastida Compare
Picea abies HCCA Cluster_447 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_13 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_148 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_215 0.07 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_231 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_78 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_137 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_49 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_125 0.11 Archaeplastida Compare
Zea mays HCCA Cluster_272 0.061 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_42 0.04 LandPlants Compare
Amborella trichopoda HCCA Cluster_125 0.03 LandPlants Compare
Amborella trichopoda HCCA Cluster_216 0.025 LandPlants Compare
Amborella trichopoda HCCA Cluster_221 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_55 0.08 LandPlants Compare
Marchantia polymorpha HCCA Cluster_11 0.133 LandPlants Compare
Oryza sativa HCCA Cluster_82 0.071 LandPlants Compare
Oryza sativa HCCA Cluster_184 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_257 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_287 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_25 0.111 LandPlants Compare
Physcomitrella patens HCCA Cluster_126 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_167 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_201 0.023 LandPlants Compare
Physcomitrella patens HCCA Cluster_285 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_307 0.027 LandPlants Compare
Picea abies HCCA Cluster_180 0.069 LandPlants Compare
Picea abies HCCA Cluster_336 0.017 LandPlants Compare
Picea abies HCCA Cluster_340 0.015 LandPlants Compare
Picea abies HCCA Cluster_447 0.028 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_9 0.022 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_114 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_13 0.04 LandPlants Compare
Solanum lycopersicum HCCA Cluster_25 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_148 0.024 LandPlants Compare
Solanum lycopersicum HCCA Cluster_215 0.115 LandPlants Compare
Solanum lycopersicum HCCA Cluster_231 0.023 LandPlants Compare
Vitis vinifera HCCA Cluster_78 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_93 0.062 LandPlants Compare
Vitis vinifera HCCA Cluster_137 0.026 LandPlants Compare
Zea mays HCCA Cluster_125 0.133 LandPlants Compare
Zea mays HCCA Cluster_272 0.05 LandPlants Compare
Amborella trichopoda HCCA Cluster_42 0.04 SeedPlants Compare
Amborella trichopoda HCCA Cluster_125 0.035 SeedPlants Compare
Amborella trichopoda HCCA Cluster_216 0.025 SeedPlants Compare
Amborella trichopoda HCCA Cluster_221 0.016 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_55 0.079 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_142 0.019 SeedPlants Compare
Oryza sativa HCCA Cluster_82 0.071 SeedPlants Compare
Oryza sativa HCCA Cluster_184 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_247 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_287 0.018 SeedPlants Compare
Picea abies HCCA Cluster_4 0.014 SeedPlants Compare
Picea abies HCCA Cluster_180 0.06 SeedPlants Compare
Picea abies HCCA Cluster_336 0.017 SeedPlants Compare
Picea abies HCCA Cluster_447 0.027 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_13 0.04 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_106 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_133 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_148 0.024 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_215 0.111 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_231 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_78 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_93 0.06 SeedPlants Compare
Vitis vinifera HCCA Cluster_137 0.031 SeedPlants Compare
Zea mays HCCA Cluster_14 0.012 SeedPlants Compare
Zea mays HCCA Cluster_49 0.014 SeedPlants Compare
Zea mays HCCA Cluster_125 0.13 SeedPlants Compare
Zea mays HCCA Cluster_161 0.013 SeedPlants Compare
Zea mays HCCA Cluster_272 0.05 SeedPlants Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms