Coexpression cluster: Cluster_283 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 15.09% (8/53) 4.62 0.0 0.0
GO:0016070 RNA metabolic process 15.09% (8/53) 4.21 0.0 1e-06
GO:0140101 catalytic activity, acting on a tRNA 9.43% (5/53) 5.58 0.0 4e-06
GO:0006399 tRNA metabolic process 9.43% (5/53) 5.33 0.0 5e-06
GO:0097159 organic cyclic compound binding 37.74% (20/53) 1.82 0.0 5e-06
GO:1901363 heterocyclic compound binding 37.74% (20/53) 1.82 0.0 5e-06
GO:0005488 binding 50.94% (27/53) 1.43 0.0 6e-06
GO:0090304 nucleic acid metabolic process 15.09% (8/53) 3.75 0.0 6e-06
GO:0006418 tRNA aminoacylation for protein translation 7.55% (4/53) 6.07 0.0 8e-06
GO:0034660 ncRNA metabolic process 9.43% (5/53) 5.05 0.0 8e-06
GO:0043038 amino acid activation 7.55% (4/53) 5.83 1e-06 1.1e-05
GO:0043039 tRNA aminoacylation 7.55% (4/53) 5.83 1e-06 1.1e-05
GO:0006139 nucleobase-containing compound metabolic process 15.09% (8/53) 3.34 1e-06 1.6e-05
GO:0140098 catalytic activity, acting on RNA 11.32% (6/53) 4.12 1e-06 1.7e-05
GO:0003674 molecular_function 64.15% (34/53) 0.99 2e-06 2.5e-05
GO:0046483 heterocycle metabolic process 15.09% (8/53) 3.19 2e-06 2.8e-05
GO:0006725 cellular aromatic compound metabolic process 15.09% (8/53) 3.17 3e-06 2.9e-05
GO:1901360 organic cyclic compound metabolic process 15.09% (8/53) 3.13 3e-06 3.3e-05
GO:0035639 purine ribonucleoside triphosphate binding 20.75% (11/53) 2.42 5e-06 4.4e-05
GO:0034641 cellular nitrogen compound metabolic process 16.98% (9/53) 2.81 5e-06 4.4e-05
GO:0000166 nucleotide binding 22.64% (12/53) 2.06 2.1e-05 0.000172
GO:1901265 nucleoside phosphate binding 22.64% (12/53) 2.06 2.1e-05 0.000172
GO:0006520 cellular amino acid metabolic process 7.55% (4/53) 4.56 2.6e-05 0.000202
GO:0043168 anion binding 22.64% (12/53) 2.01 3e-05 0.000224
GO:0036094 small molecule binding 22.64% (12/53) 1.99 3.3e-05 0.000238
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.66% (3/53) 5.44 4.7e-05 0.000307
GO:0004812 aminoacyl-tRNA ligase activity 5.66% (3/53) 5.44 4.7e-05 0.000307
GO:0032553 ribonucleotide binding 20.75% (11/53) 2.04 5.6e-05 0.000331
GO:0097367 carbohydrate derivative binding 20.75% (11/53) 2.04 5.8e-05 0.000333
GO:0032555 purine ribonucleotide binding 20.75% (11/53) 2.05 5.3e-05 0.000336
GO:0017076 purine nucleotide binding 20.75% (11/53) 2.04 5.5e-05 0.000339
GO:0005737 cytoplasm 5.66% (3/53) 5.1 9.5e-05 0.000434
GO:0005643 nuclear pore 3.77% (2/53) 7.1 9.4e-05 0.000441
GO:0001882 nucleoside binding 7.55% (4/53) 4.08 9.4e-05 0.000452
GO:0001883 purine nucleoside binding 7.55% (4/53) 4.09 9.2e-05 0.000455
GO:0005525 GTP binding 7.55% (4/53) 4.09 9.2e-05 0.000455
GO:0032549 ribonucleoside binding 7.55% (4/53) 4.09 9.2e-05 0.000455
GO:0032550 purine ribonucleoside binding 7.55% (4/53) 4.09 9.2e-05 0.000455
GO:0032561 guanyl ribonucleotide binding 7.55% (4/53) 4.09 9.2e-05 0.000455
GO:0019001 guanyl nucleotide binding 7.55% (4/53) 4.04 0.000105 0.000466
GO:0043170 macromolecule metabolic process 22.64% (12/53) 1.79 0.000132 0.000571
GO:0009982 pseudouridine synthase activity 3.77% (2/53) 6.75 0.000156 0.000659
GO:0003676 nucleic acid binding 16.98% (9/53) 2.1 0.000219 0.000906
GO:0001522 pseudouridine synthesis 3.77% (2/53) 6.47 0.000232 0.000938
GO:0006807 nitrogen compound metabolic process 22.64% (12/53) 1.66 0.000302 0.001195
GO:0044428 nuclear part 5.66% (3/53) 4.5 0.000325 0.001232
GO:0016874 ligase activity 5.66% (3/53) 4.5 0.000325 0.001232
GO:0016866 intramolecular transferase activity 3.77% (2/53) 6.1 0.000392 0.001368
GO:0019752 carboxylic acid metabolic process 7.55% (4/53) 3.56 0.000371 0.001376
GO:0006082 organic acid metabolic process 7.55% (4/53) 3.55 0.000388 0.001381
GO:0043436 oxoacid metabolic process 7.55% (4/53) 3.55 0.000382 0.001389
GO:0044237 cellular metabolic process 22.64% (12/53) 1.61 0.000415 0.001419
GO:0003924 GTPase activity 5.66% (3/53) 4.32 0.000465 0.001563
GO:0003824 catalytic activity 33.96% (18/53) 1.11 0.000862 0.002842
GO:0009451 RNA modification 3.77% (2/53) 5.51 0.000888 0.002873
GO:0044424 intracellular part 13.21% (7/53) 2.13 0.001015 0.003226
GO:0019136 deoxynucleoside kinase activity 1.89% (1/53) 9.56 0.001326 0.003935
GO:0006432 phenylalanyl-tRNA aminoacylation 1.89% (1/53) 9.56 0.001326 0.003935
GO:0004797 thymidine kinase activity 1.89% (1/53) 9.56 0.001326 0.003935
GO:0019206 nucleoside kinase activity 1.89% (1/53) 9.56 0.001326 0.003935
GO:0044464 cell part 13.21% (7/53) 2.05 0.001406 0.004102
GO:0043167 ion binding 22.64% (12/53) 1.38 0.00165 0.004736
GO:0044281 small molecule metabolic process 7.55% (4/53) 2.94 0.001846 0.005215
GO:0044238 primary metabolic process 22.64% (12/53) 1.36 0.001886 0.005246
GO:0005524 ATP binding 13.21% (7/53) 1.94 0.002169 0.005938
GO:0009987 cellular process 22.64% (12/53) 1.33 0.002259 0.006091
GO:0006433 prolyl-tRNA aminoacylation 1.89% (1/53) 8.56 0.002651 0.006839
GO:0004827 proline-tRNA ligase activity 1.89% (1/53) 8.56 0.002651 0.006839
GO:0071704 organic substance metabolic process 22.64% (12/53) 1.31 0.0026 0.006907
GO:0008144 drug binding 13.21% (7/53) 1.85 0.003089 0.007856
GO:0019205 nucleobase-containing compound kinase activity 1.89% (1/53) 7.97 0.003974 0.009964
GO:0005730 nucleolus 1.89% (1/53) 7.56 0.005296 0.012738
GO:0017150 tRNA dihydrouridine synthase activity 1.89% (1/53) 7.56 0.005296 0.012738
GO:0008152 metabolic process 26.42% (14/53) 1.06 0.005265 0.013017
GO:0016853 isomerase activity 3.77% (2/53) 3.94 0.007564 0.017953
GO:0000049 tRNA binding 1.89% (1/53) 6.97 0.007933 0.018339
GO:0017056 structural constituent of nuclear pore 1.89% (1/53) 6.97 0.007933 0.018339
GO:0044446 intracellular organelle part 5.66% (3/53) 2.82 0.008872 0.01999
GO:0044422 organelle part 5.66% (3/53) 2.82 0.008872 0.01999
GO:0017111 nucleoside-triphosphatase activity 5.66% (3/53) 2.8 0.009176 0.020416
GO:0005515 protein binding 15.09% (8/53) 1.41 0.009671 0.021253
GO:0030554 adenyl nucleotide binding 13.21% (7/53) 1.53 0.010171 0.021553
GO:0032559 adenyl ribonucleotide binding 13.21% (7/53) 1.53 0.010057 0.021567
GO:0016779 nucleotidyltransferase activity 3.77% (2/53) 3.74 0.009944 0.021586
GO:0004045 aminoacyl-tRNA hydrolase activity 1.89% (1/53) 6.56 0.010564 0.022122
GO:0016462 pyrophosphatase activity 5.66% (3/53) 2.71 0.010956 0.022677
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.66% (3/53) 2.7 0.011127 0.022766
GO:0016817 hydrolase activity, acting on acid anhydrides 5.66% (3/53) 2.69 0.0113 0.022856
GO:1901564 organonitrogen compound metabolic process 15.09% (8/53) 1.31 0.014349 0.028698
GO:0019843 rRNA binding 1.89% (1/53) 5.47 0.022317 0.044138
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_5 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_90 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_156 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.041 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_31 0.02 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_110 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_181 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_194 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_7 0.023 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_40 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.032 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_66 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_114 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_121 0.028 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_236 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_210 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_380 0.031 Gene family Compare
Picea abies HCCA cluster Cluster_394 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.029 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_113 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_139 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_159 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_243 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.051 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_99 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_112 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_116 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.033 Gene family Compare
Vitis vinifera HCCA cluster Cluster_179 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.045 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.033 Gene family Compare
Zea mays HCCA cluster Cluster_153 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_214 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.034 Gene family Compare
Zea mays HCCA cluster Cluster_336 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.016 Gene family Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms