Coexpression cluster: Cluster_148 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 9.15% (15/164) 3.49 0.0 0.0
GO:0090304 nucleic acid metabolic process 10.37% (17/164) 3.21 0.0 0.0
GO:0032774 RNA biosynthetic process 5.49% (9/164) 4.29 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 10.37% (17/164) 2.79 0.0 0.0
GO:0097659 nucleic acid-templated transcription 4.88% (8/164) 4.7 0.0 0.0
GO:0006351 transcription, DNA-templated 4.88% (8/164) 4.7 0.0 0.0
GO:0046483 heterocycle metabolic process 10.37% (17/164) 2.65 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 10.37% (17/164) 2.63 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 10.37% (17/164) 2.59 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 11.59% (19/164) 2.26 0.0 1e-06
GO:0044424 intracellular part 12.2% (20/164) 2.02 0.0 3e-06
GO:0044428 nuclear part 4.27% (7/164) 4.09 0.0 4e-06
GO:0034654 nucleobase-containing compound biosynthetic process 5.49% (9/164) 3.37 0.0 5e-06
GO:0044464 cell part 12.2% (20/164) 1.94 0.0 6e-06
GO:0044422 organelle part 6.1% (10/164) 2.93 1e-06 1.4e-05
GO:0044446 intracellular organelle part 6.1% (10/164) 2.93 1e-06 1.4e-05
GO:0018130 heterocycle biosynthetic process 5.49% (9/164) 3.08 1e-06 2.1e-05
GO:0019438 aromatic compound biosynthetic process 5.49% (9/164) 3.05 2e-06 2.2e-05
GO:0003676 nucleic acid binding 12.8% (21/164) 1.69 2e-06 3.1e-05
GO:1901362 organic cyclic compound biosynthetic process 5.49% (9/164) 2.92 4e-06 4.3e-05
GO:0003712 transcription coregulator activity 2.44% (4/164) 5.23 4e-06 4.5e-05
GO:0035145 exon-exon junction complex 1.22% (2/164) 7.93 1.7e-05 0.000187
GO:0009059 macromolecule biosynthetic process 6.1% (10/164) 2.37 2.7e-05 0.000282
GO:0032991 protein-containing complex 7.93% (13/164) 2.0 2.7e-05 0.000286
GO:1990234 transferase complex 2.44% (4/164) 4.4 3.9e-05 0.000384
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.44% (4/164) 4.34 4.6e-05 0.000438
GO:0006357 regulation of transcription by RNA polymerase II 1.83% (3/164) 5.34 5.3e-05 0.000449
GO:0016592 mediator complex 1.83% (3/164) 5.34 5.3e-05 0.000449
GO:0003677 DNA binding 7.93% (13/164) 1.9 5.1e-05 0.000466
GO:0034062 5'-3' RNA polymerase activity 2.44% (4/164) 4.2 6.8e-05 0.000544
GO:0097747 RNA polymerase activity 2.44% (4/164) 4.2 6.8e-05 0.000544
GO:1902494 catalytic complex 3.05% (5/164) 3.54 7.6e-05 0.000584
GO:0034645 cellular macromolecule biosynthetic process 5.49% (9/164) 2.34 8.3e-05 0.000621
GO:0044271 cellular nitrogen compound biosynthetic process 6.1% (10/164) 2.13 0.000109 0.000765
GO:0016779 nucleotidyltransferase activity 3.05% (5/164) 3.43 0.000108 0.000779
GO:0030880 RNA polymerase complex 1.22% (2/164) 6.34 0.000248 0.001698
GO:0005515 protein binding 12.8% (21/164) 1.17 0.000425 0.002823
GO:0005488 binding 29.88% (49/164) 0.66 0.000496 0.003213
GO:0061695 transferase complex, transferring phosphorus-containing groups 1.22% (2/164) 5.76 0.000592 0.003731
GO:0003690 double-stranded DNA binding 1.83% (3/164) 4.09 0.000743 0.004456
GO:0042393 histone binding 1.22% (2/164) 5.61 0.000737 0.004535
GO:0044451 nucleoplasm part 1.83% (3/164) 4.02 0.000849 0.004972
GO:0006396 RNA processing 2.44% (4/164) 2.95 0.001857 0.010622
GO:0044249 cellular biosynthetic process 6.1% (10/164) 1.59 0.001935 0.010818
GO:0008380 RNA splicing 1.22% (2/164) 4.76 0.002454 0.013414
GO:0043170 macromolecule metabolic process 12.8% (21/164) 0.97 0.002538 0.013573
GO:0005575 cellular_component 12.8% (21/164) 0.96 0.002643 0.013833
GO:1901576 organic substance biosynthetic process 6.1% (10/164) 1.52 0.00274 0.01404
GO:0033554 cellular response to stress 1.83% (3/164) 3.36 0.003163 0.015256
GO:0006974 cellular response to DNA damage stimulus 1.83% (3/164) 3.36 0.003163 0.015256
GO:0051716 cellular response to stimulus 1.83% (3/164) 3.36 0.003163 0.015256
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity 0.61% (1/164) 7.93 0.004105 0.019052
GO:0032299 ribonuclease H2 complex 0.61% (1/164) 7.93 0.004105 0.019052
GO:0009058 biosynthetic process 6.1% (10/164) 1.36 0.005949 0.027101
GO:0006397 mRNA processing 1.22% (2/164) 4.02 0.006755 0.030213
GO:0005634 nucleus 3.05% (5/164) 2.07 0.007096 0.030626
GO:0006807 nitrogen compound metabolic process 12.8% (21/164) 0.84 0.007024 0.030856
GO:0106068 SUMO ligase complex 0.61% (1/164) 6.93 0.008192 0.033589
GO:0006333 chromatin assembly or disassembly 0.61% (1/164) 6.93 0.008192 0.033589
GO:0030915 Smc5-Smc6 complex 0.61% (1/164) 6.93 0.008192 0.033589
GO:0016071 mRNA metabolic process 1.22% (2/164) 3.76 0.009627 0.038823
GO:0044237 cellular metabolic process 12.8% (21/164) 0.79 0.010198 0.040463
GO:0005666 RNA polymerase III complex 0.61% (1/164) 6.34 0.012264 0.043723
GO:0031570 DNA integrity checkpoint 0.61% (1/164) 6.34 0.012264 0.043723
GO:0000077 DNA damage checkpoint 0.61% (1/164) 6.34 0.012264 0.043723
GO:0000428 DNA-directed RNA polymerase complex 0.61% (1/164) 6.34 0.012264 0.043723
GO:0055029 nuclear DNA-directed RNA polymerase complex 0.61% (1/164) 6.34 0.012264 0.043723
GO:0043227 membrane-bounded organelle 3.05% (5/164) 1.9 0.011382 0.043748
GO:0043231 intracellular membrane-bounded organelle 3.05% (5/164) 1.9 0.011382 0.043748
GO:0019219 regulation of nucleobase-containing compound metabolic process 4.88% (8/164) 1.35 0.013778 0.045191
GO:0003674 molecular_function 40.85% (67/164) 0.33 0.013756 0.045729
GO:0006355 regulation of transcription, DNA-templated 4.88% (8/164) 1.36 0.013581 0.045767
GO:2001141 regulation of RNA biosynthetic process 4.88% (8/164) 1.36 0.013581 0.045767
GO:1903506 regulation of nucleic acid-templated transcription 4.88% (8/164) 1.36 0.013581 0.045767
GO:0051252 regulation of RNA metabolic process 4.88% (8/164) 1.36 0.013581 0.045767
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_6 0.033 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_14 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_25 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_28 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_51 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_90 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.033 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_150 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_162 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_202 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.033 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_249 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_250 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_273 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_277 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_81 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.022 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_148 0.027 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_6 0.03 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.028 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_60 0.028 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_85 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_110 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_120 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_138 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_151 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_167 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_206 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_210 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_313 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_325 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_19 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_23 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_102 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_115 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_164 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_203 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_217 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_239 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_369 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_468 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_473 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_497 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_10 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_20 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.029 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_133 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_152 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_13 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.033 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.036 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_131 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.056 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_212 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_255 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_261 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.03 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_8 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_10 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.042 Gene family Compare
Vitis vinifera HCCA cluster Cluster_74 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_78 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_96 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_112 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_116 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_125 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.034 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_192 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_197 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_215 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.034 Gene family Compare
Vitis vinifera HCCA cluster Cluster_243 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_27 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_38 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_85 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_106 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_154 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_164 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_189 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_201 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_220 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_224 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_251 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_275 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_288 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.075 Gene family Compare
Zea mays HCCA cluster Cluster_328 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.041 Gene family Compare
Zea mays HCCA cluster Cluster_344 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_352 0.025 Gene family Compare
Sequences (164) (download table)

InterPro Domains

GO Terms

Family Terms