Coexpression cluster: Cluster_330 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046983 protein dimerization activity 6.17% (5/81) 3.8 3.2e-05 0.005042
GO:0003676 nucleic acid binding 13.58% (11/81) 2.06 6.4e-05 0.005102
GO:0000375 RNA splicing, via transesterification reactions 2.47% (2/81) 6.09 0.000392 0.008964
GO:0000398 mRNA splicing, via spliceosome 2.47% (2/81) 6.09 0.000392 0.008964
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2.47% (2/81) 6.09 0.000392 0.008964
GO:0005515 protein binding 14.81% (12/81) 1.63 0.000464 0.009287
GO:0008380 RNA splicing 2.47% (2/81) 5.67 0.000705 0.010257
GO:0043231 intracellular membrane-bounded organelle 4.94% (4/81) 3.34 0.000675 0.010807
GO:0043227 membrane-bounded organelle 4.94% (4/81) 3.34 0.000675 0.010807
GO:0005634 nucleus 4.94% (4/81) 3.61 0.000336 0.013456
GO:0140110 transcription regulator activity 6.17% (5/81) 3.14 0.000273 0.01456
GO:0031326 regulation of cellular biosynthetic process 6.17% (5/81) 2.38 0.002839 0.020648
GO:0010556 regulation of macromolecule biosynthetic process 6.17% (5/81) 2.38 0.002839 0.020648
GO:0009889 regulation of biosynthetic process 6.17% (5/81) 2.38 0.002839 0.020648
GO:2000112 regulation of cellular macromolecule biosynthetic process 6.17% (5/81) 2.38 0.002839 0.020648
GO:0031323 regulation of cellular metabolic process 6.17% (5/81) 2.29 0.003654 0.021653
GO:0051171 regulation of nitrogen compound metabolic process 6.17% (5/81) 2.3 0.003595 0.022123
GO:0080090 regulation of primary metabolic process 6.17% (5/81) 2.3 0.003595 0.022123
GO:0010468 regulation of gene expression 6.17% (5/81) 2.34 0.003201 0.022267
GO:0019222 regulation of metabolic process 6.17% (5/81) 2.24 0.004184 0.022314
GO:0030008 TRAPP complex 1.23% (1/81) 7.99 0.003918 0.022388
GO:0016071 mRNA metabolic process 2.47% (2/81) 4.53 0.003406 0.022704
GO:0060255 regulation of macromolecule metabolic process 6.17% (5/81) 2.25 0.004151 0.022904
GO:0019219 regulation of nucleobase-containing compound metabolic process 6.17% (5/81) 2.39 0.002741 0.024368
GO:0003700 DNA-binding transcription factor activity 4.94% (4/81) 2.94 0.00187 0.024936
GO:1903506 regulation of nucleic acid-templated transcription 6.17% (5/81) 2.39 0.002717 0.025576
GO:0006355 regulation of transcription, DNA-templated 6.17% (5/81) 2.39 0.002717 0.025576
GO:0051252 regulation of RNA metabolic process 6.17% (5/81) 2.39 0.002717 0.025576
GO:2001141 regulation of RNA biosynthetic process 6.17% (5/81) 2.39 0.002717 0.025576
GO:0050794 regulation of cellular process 7.41% (6/81) 1.93 0.005034 0.025983
GO:0050789 regulation of biological process 7.41% (6/81) 1.87 0.006027 0.029223
GO:0004345 glucose-6-phosphate dehydrogenase activity 1.23% (1/81) 7.41 0.005871 0.029356
GO:0006397 mRNA processing 2.47% (2/81) 4.78 0.002419 0.029771
GO:0065007 biological regulation 7.41% (6/81) 1.83 0.007003 0.032956
GO:0043226 organelle 4.94% (4/81) 2.31 0.00873 0.0388
GO:0043229 intracellular organelle 4.94% (4/81) 2.32 0.008657 0.039577
GO:0005622 intracellular anatomical structure 4.94% (4/81) 2.27 0.009787 0.042322
GO:0008079 translation termination factor activity 1.23% (1/81) 6.41 0.011708 0.04569
GO:0003747 translation release factor activity 1.23% (1/81) 6.41 0.011708 0.04569
GO:0061919 process utilizing autophagic mechanism 1.23% (1/81) 6.41 0.011708 0.04569
GO:0006914 autophagy 1.23% (1/81) 6.41 0.011708 0.04569
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_93 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_30 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_35 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_198 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_217 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_12 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_128 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_197 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_219 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_98 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_249 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_342 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_14 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_92 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_190 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_104 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_300 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_86 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_114 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_150 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_161 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_38 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_57 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_297 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_93 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_106 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_191 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_235 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_249 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_30 0.019 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_35 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_42 0.014 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_107 0.019 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_117 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_136 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_179 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_198 0.019 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_202 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_205 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_217 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_128 0.021 LandPlants Compare
Gingko biloba HCCA Cluster_197 0.021 LandPlants Compare
Gingko biloba HCCA Cluster_219 0.026 LandPlants Compare
Gingko biloba HCCA Cluster_233 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_254 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_261 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_263 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_4 0.021 LandPlants Compare
Marchantia polymorpha HCCA Cluster_112 0.016 LandPlants Compare
Marchantia polymorpha HCCA Cluster_170 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_15 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_20 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_87 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_96 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_116 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_146 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_249 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_342 0.02 LandPlants Compare
Physcomitrella patens HCCA Cluster_14 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_89 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_128 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_190 0.021 LandPlants Compare
Physcomitrella patens HCCA Cluster_266 0.016 LandPlants Compare
Picea abies HCCA Cluster_83 0.017 LandPlants Compare
Picea abies HCCA Cluster_104 0.026 LandPlants Compare
Picea abies HCCA Cluster_220 0.015 LandPlants Compare
Picea abies HCCA Cluster_422 0.016 LandPlants Compare
Picea abies HCCA Cluster_429 0.016 LandPlants Compare
Picea abies HCCA Cluster_458 0.016 LandPlants Compare
Picea abies HCCA Cluster_515 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_86 0.024 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_172 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.024 LandPlants Compare
Solanum lycopersicum HCCA Cluster_145 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_150 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_223 0.023 LandPlants Compare
Solanum lycopersicum HCCA Cluster_259 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_38 0.025 LandPlants Compare
Vitis vinifera HCCA Cluster_57 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_156 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_185 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_204 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_233 0.016 LandPlants Compare
Zea mays HCCA Cluster_12 0.015 LandPlants Compare
Zea mays HCCA Cluster_87 0.016 LandPlants Compare
Zea mays HCCA Cluster_101 0.017 LandPlants Compare
Zea mays HCCA Cluster_140 0.016 LandPlants Compare
Zea mays HCCA Cluster_166 0.016 LandPlants Compare
Zea mays HCCA Cluster_181 0.023 LandPlants Compare
Zea mays HCCA Cluster_199 0.015 LandPlants Compare
Zea mays HCCA Cluster_215 0.017 LandPlants Compare
Zea mays HCCA Cluster_267 0.017 LandPlants Compare
Zea mays HCCA Cluster_290 0.015 LandPlants Compare
Zea mays HCCA Cluster_297 0.018 LandPlants Compare
Zea mays HCCA Cluster_348 0.017 LandPlants Compare
Zea mays HCCA Cluster_356 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_69 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_106 0.015 SeedPlants Compare
Amborella trichopoda HCCA Cluster_187 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_209 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_30 0.019 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_34 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_35 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_42 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_107 0.019 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_128 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_136 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_172 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_198 0.019 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_202 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_217 0.016 SeedPlants Compare
Gingko biloba HCCA Cluster_12 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_128 0.021 SeedPlants Compare
Gingko biloba HCCA Cluster_162 0.013 SeedPlants Compare
Gingko biloba HCCA Cluster_177 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_197 0.021 SeedPlants Compare
Gingko biloba HCCA Cluster_214 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_219 0.025 SeedPlants Compare
Gingko biloba HCCA Cluster_233 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_261 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_16 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_20 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_87 0.02 SeedPlants Compare
Oryza sativa HCCA Cluster_96 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_116 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_142 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_146 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_318 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_342 0.02 SeedPlants Compare
Picea abies HCCA Cluster_83 0.017 SeedPlants Compare
Picea abies HCCA Cluster_104 0.019 SeedPlants Compare
Picea abies HCCA Cluster_300 0.012 SeedPlants Compare
Picea abies HCCA Cluster_371 0.012 SeedPlants Compare
Picea abies HCCA Cluster_422 0.016 SeedPlants Compare
Picea abies HCCA Cluster_429 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.024 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_40 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_79 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_106 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_127 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_150 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_183 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_196 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_223 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_229 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_38 0.021 SeedPlants Compare
Vitis vinifera HCCA Cluster_57 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_78 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_98 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_154 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_204 0.016 SeedPlants Compare
Zea mays HCCA Cluster_12 0.015 SeedPlants Compare
Zea mays HCCA Cluster_87 0.016 SeedPlants Compare
Zea mays HCCA Cluster_181 0.015 SeedPlants Compare
Zea mays HCCA Cluster_199 0.015 SeedPlants Compare
Zea mays HCCA Cluster_215 0.017 SeedPlants Compare
Zea mays HCCA Cluster_260 0.014 SeedPlants Compare
Zea mays HCCA Cluster_264 0.013 SeedPlants Compare
Zea mays HCCA Cluster_267 0.017 SeedPlants Compare
Zea mays HCCA Cluster_290 0.015 SeedPlants Compare
Zea mays HCCA Cluster_297 0.012 SeedPlants Compare
Zea mays HCCA Cluster_304 0.014 SeedPlants Compare
Zea mays HCCA Cluster_356 0.015 SeedPlants Compare
Sequences (81) (download table)

InterPro Domains

GO Terms

Family Terms