Coexpression cluster: Cluster_170 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 17.72% (14/79) 3.85 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 22.78% (18/79) 3.23 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 17.72% (14/79) 3.67 0.0 0.0
GO:0005840 ribosome 13.92% (11/79) 4.33 0.0 0.0
GO:0003735 structural constituent of ribosome 13.92% (11/79) 4.29 0.0 0.0
GO:1990904 ribonucleoprotein complex 13.92% (11/79) 4.17 0.0 0.0
GO:0043228 non-membrane-bounded organelle 13.92% (11/79) 4.19 0.0 0.0
GO:0005198 structural molecule activity 13.92% (11/79) 4.19 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 13.92% (11/79) 4.19 0.0 0.0
GO:0044249 cellular biosynthetic process 18.99% (15/79) 3.23 0.0 0.0
GO:1901576 organic substance biosynthetic process 18.99% (15/79) 3.16 0.0 0.0
GO:0006412 translation 12.66% (10/79) 4.16 0.0 0.0
GO:0043043 peptide biosynthetic process 12.66% (10/79) 4.12 0.0 0.0
GO:0043604 amide biosynthetic process 12.66% (10/79) 4.08 0.0 0.0
GO:0009058 biosynthetic process 18.99% (15/79) 3.0 0.0 0.0
GO:0006518 peptide metabolic process 12.66% (10/79) 4.08 0.0 0.0
GO:0043603 cellular amide metabolic process 12.66% (10/79) 4.01 0.0 0.0
GO:0009059 macromolecule biosynthetic process 13.92% (11/79) 3.56 0.0 0.0
GO:0044444 cytoplasmic part 13.92% (11/79) 3.39 0.0 0.0
GO:0044424 intracellular part 18.99% (15/79) 2.66 0.0 0.0
GO:0009987 cellular process 31.65% (25/79) 1.81 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 12.66% (10/79) 3.54 0.0 0.0
GO:0044464 cell part 18.99% (15/79) 2.58 0.0 0.0
GO:0044237 cellular metabolic process 27.85% (22/79) 1.91 0.0 0.0
GO:0043226 organelle 13.92% (11/79) 3.14 0.0 0.0
GO:0043229 intracellular organelle 13.92% (11/79) 3.14 0.0 0.0
GO:0016874 ligase activity 7.59% (6/79) 4.92 0.0 0.0
GO:0032991 protein-containing complex 15.19% (12/79) 2.93 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 24.05% (19/79) 1.98 0.0 2e-06
GO:0006807 nitrogen compound metabolic process 25.32% (20/79) 1.82 1e-06 4e-06
GO:0005622 intracellular 7.59% (6/79) 4.1 1e-06 1.2e-05
GO:0006418 tRNA aminoacylation for protein translation 5.06% (4/79) 5.49 2e-06 1.6e-05
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.06% (4/79) 5.28 4e-06 2.7e-05
GO:0004812 aminoacyl-tRNA ligase activity 5.06% (4/79) 5.28 4e-06 2.7e-05
GO:0043038 amino acid activation 5.06% (4/79) 5.25 4e-06 2.8e-05
GO:0043039 tRNA aminoacylation 5.06% (4/79) 5.25 4e-06 2.8e-05
GO:0006520 cellular amino acid metabolic process 6.33% (5/79) 4.3 6e-06 4.1e-05
GO:0140101 catalytic activity, acting on a tRNA 5.06% (4/79) 4.68 1.9e-05 0.000129
GO:0071704 organic substance metabolic process 25.32% (20/79) 1.47 2.1e-05 0.000142
GO:0008152 metabolic process 30.38% (24/79) 1.26 2.8e-05 0.00018
GO:0006399 tRNA metabolic process 5.06% (4/79) 4.43 3.8e-05 0.000237
GO:0043170 macromolecule metabolic process 20.25% (16/79) 1.63 4.6e-05 0.000283
GO:0005575 cellular_component 20.25% (16/79) 1.62 4.8e-05 0.000288
GO:0046483 heterocycle metabolic process 10.13% (8/79) 2.61 5e-05 0.000293
GO:0006725 cellular aromatic compound metabolic process 10.13% (8/79) 2.59 5.5e-05 0.000315
GO:1901360 organic cyclic compound metabolic process 10.13% (8/79) 2.56 6.6e-05 0.000371
GO:0034660 ncRNA metabolic process 5.06% (4/79) 4.15 8e-05 0.00044
GO:0044281 small molecule metabolic process 7.59% (6/79) 2.95 0.000132 0.000711
GO:0044238 primary metabolic process 22.78% (18/79) 1.37 0.000145 0.000762
GO:0019752 carboxylic acid metabolic process 6.33% (5/79) 3.31 0.000156 0.000806
GO:0006082 organic acid metabolic process 6.33% (5/79) 3.29 0.000165 0.000818
GO:0043436 oxoacid metabolic process 6.33% (5/79) 3.3 0.000162 0.000819
GO:0008150 biological_process 36.71% (29/79) 0.94 0.000189 0.000922
GO:0005737 cytoplasm 3.8% (3/79) 4.52 0.000311 0.001487
GO:0032550 purine ribonucleoside binding 5.06% (4/79) 3.51 0.000432 0.001856
GO:0005525 GTP binding 5.06% (4/79) 3.51 0.000432 0.001856
GO:0001883 purine nucleoside binding 5.06% (4/79) 3.51 0.000432 0.001856
GO:0032561 guanyl ribonucleotide binding 5.06% (4/79) 3.51 0.000432 0.001856
GO:0032549 ribonucleoside binding 5.06% (4/79) 3.51 0.000432 0.001856
GO:0001882 nucleoside binding 5.06% (4/79) 3.51 0.000441 0.001865
GO:0033014 tetrapyrrole biosynthetic process 2.53% (2/79) 6.08 0.000399 0.00187
GO:0044267 cellular protein metabolic process 13.92% (11/79) 1.73 0.000452 0.001881
GO:0019001 guanyl nucleotide binding 5.06% (4/79) 3.47 0.000489 0.001973
GO:0016070 RNA metabolic process 6.33% (5/79) 2.96 0.000482 0.001975
GO:0033013 tetrapyrrole metabolic process 2.53% (2/79) 5.89 0.000515 0.002044
GO:0006139 nucleobase-containing compound metabolic process 7.59% (6/79) 2.35 0.001199 0.004688
GO:0003674 molecular_function 49.37% (39/79) 0.61 0.001262 0.00486
GO:0016879 ligase activity, forming carbon-nitrogen bonds 2.53% (2/79) 5.08 0.00162 0.006146
GO:0006423 cysteinyl-tRNA aminoacylation 1.27% (1/79) 8.98 0.001977 0.006146
GO:0006426 glycyl-tRNA aminoacylation 1.27% (1/79) 8.98 0.001977 0.006146
GO:0004820 glycine-tRNA ligase activity 1.27% (1/79) 8.98 0.001977 0.006146
GO:0004418 hydroxymethylbilane synthase activity 1.27% (1/79) 8.98 0.001977 0.006146
GO:0004817 cysteine-tRNA ligase activity 1.27% (1/79) 8.98 0.001977 0.006146
GO:0042886 amide transport 3.8% (3/79) 3.67 0.001727 0.006277
GO:0015833 peptide transport 3.8% (3/79) 3.67 0.001727 0.006277
GO:0015031 protein transport 3.8% (3/79) 3.67 0.001727 0.006277
GO:0045184 establishment of protein localization 3.8% (3/79) 3.66 0.001769 0.006339
GO:0018130 heterocycle biosynthetic process 5.06% (4/79) 2.96 0.001796 0.006347
GO:0140098 catalytic activity, acting on RNA 5.06% (4/79) 2.95 0.001821 0.006349
GO:0033036 macromolecule localization 3.8% (3/79) 3.62 0.001898 0.006361
GO:0008104 protein localization 3.8% (3/79) 3.62 0.001898 0.006361
GO:0090304 nucleic acid metabolic process 6.33% (5/79) 2.5 0.001959 0.00648
GO:0019438 aromatic compound biosynthetic process 5.06% (4/79) 2.94 0.001898 0.00653
GO:0044260 cellular macromolecule metabolic process 13.92% (11/79) 1.44 0.002273 0.006982
GO:0019538 protein metabolic process 13.92% (11/79) 1.42 0.002592 0.007868
GO:1901362 organic cyclic compound biosynthetic process 5.06% (4/79) 2.8 0.002665 0.007994
GO:0035639 purine ribonucleoside triphosphate binding 11.39% (9/79) 1.55 0.003507 0.0104
GO:0071705 nitrogen compound transport 3.8% (3/79) 3.27 0.003783 0.01109
GO:0004019 adenylosuccinate synthase activity 1.27% (1/79) 7.98 0.003951 0.011452
GO:0071702 organic substance transport 3.8% (3/79) 3.22 0.004201 0.012042
GO:0004853 uroporphyrinogen decarboxylase activity 1.27% (1/79) 7.4 0.00592 0.016785
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 1.27% (1/79) 6.98 0.007886 0.021416
GO:0008079 translation termination factor activity 1.27% (1/79) 6.98 0.007886 0.021416
GO:0003747 translation release factor activity 1.27% (1/79) 6.98 0.007886 0.021416
GO:0043167 ion binding 17.72% (14/79) 1.03 0.00769 0.021565
GO:0009085 lysine biosynthetic process 1.27% (1/79) 6.66 0.009848 0.025155
GO:0006553 lysine metabolic process 1.27% (1/79) 6.66 0.009848 0.025155
GO:0043648 dicarboxylic acid metabolic process 1.27% (1/79) 6.66 0.009848 0.025155
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.27% (1/79) 6.66 0.009848 0.025155
GO:0046451 diaminopimelate metabolic process 1.27% (1/79) 6.66 0.009848 0.025155
GO:0009089 lysine biosynthetic process via diaminopimelate 1.27% (1/79) 6.66 0.009848 0.025155
GO:0043168 anion binding 12.66% (10/79) 1.17 0.01304 0.032663
GO:0003723 RNA binding 3.8% (3/79) 2.62 0.012931 0.032708
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 1.27% (1/79) 6.17 0.01376 0.032871
GO:0022411 cellular component disassembly 1.27% (1/79) 6.17 0.01376 0.032871
GO:0006415 translational termination 1.27% (1/79) 6.17 0.01376 0.032871
GO:0043624 cellular protein complex disassembly 1.27% (1/79) 6.17 0.01376 0.032871
GO:0032984 protein-containing complex disassembly 1.27% (1/79) 6.17 0.01376 0.032871
GO:0036094 small molecule binding 12.66% (10/79) 1.15 0.013922 0.032953
GO:0006779 porphyrin-containing compound biosynthetic process 1.27% (1/79) 5.98 0.01571 0.036847
GO:0032553 ribonucleotide binding 11.39% (9/79) 1.18 0.017789 0.038246
GO:0017076 purine nucleotide binding 11.39% (9/79) 1.18 0.017686 0.038344
GO:0045047 protein targeting to ER 1.27% (1/79) 5.81 0.017657 0.038605
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.27% (1/79) 5.81 0.017657 0.038605
GO:0070972 protein localization to endoplasmic reticulum 1.27% (1/79) 5.81 0.017657 0.038605
GO:0006613 cotranslational protein targeting to membrane 1.27% (1/79) 5.81 0.017657 0.038605
GO:0009067 aspartate family amino acid biosynthetic process 1.27% (1/79) 5.81 0.017657 0.038605
GO:0006612 protein targeting to membrane 1.27% (1/79) 5.81 0.017657 0.038605
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.27% (1/79) 5.81 0.017657 0.038605
GO:0097367 carbohydrate derivative binding 11.39% (9/79) 1.17 0.018257 0.038928
GO:0032555 purine ribonucleotide binding 11.39% (9/79) 1.19 0.017178 0.039927
GO:0097159 organic cyclic compound binding 18.99% (15/79) 0.82 0.019679 0.039977
GO:1901363 heterocyclic compound binding 18.99% (15/79) 0.82 0.019679 0.039977
GO:0006778 porphyrin-containing compound metabolic process 1.27% (1/79) 5.66 0.019599 0.040453
GO:0072657 protein localization to membrane 1.27% (1/79) 5.66 0.019599 0.040453
GO:0090150 establishment of protein localization to membrane 1.27% (1/79) 5.66 0.019599 0.040453
GO:0009066 aspartate family amino acid metabolic process 1.27% (1/79) 5.66 0.019599 0.040453
GO:0072594 establishment of protein localization to organelle 1.27% (1/79) 5.4 0.023474 0.04588
GO:0008483 transaminase activity 1.27% (1/79) 5.4 0.023474 0.04588
GO:0016769 transferase activity, transferring nitrogenous groups 1.27% (1/79) 5.4 0.023474 0.04588
GO:0033365 protein localization to organelle 1.27% (1/79) 5.4 0.023474 0.04588
GO:0006605 protein targeting 1.27% (1/79) 5.4 0.023474 0.04588
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_12 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_30 0.084 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.05 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.189 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.057 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_206 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.054 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_245 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_269 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_313 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_47 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.053 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_85 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_86 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_135 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_187 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.142 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_9 0.055 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.056 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_87 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_45 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_126 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_288 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_302 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_325 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_186 0.064 Gene family Compare
Picea abies HCCA cluster Cluster_194 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_205 0.047 Gene family Compare
Picea abies HCCA cluster Cluster_267 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_336 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_345 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_427 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_459 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_476 0.035 Gene family Compare
Picea abies HCCA cluster Cluster_478 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_488 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_492 0.028 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_11 0.045 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_43 0.033 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_64 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_82 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_83 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_124 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.031 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_169 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_176 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_185 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_203 0.074 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_207 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_15 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_85 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.058 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.068 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_145 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_149 0.078 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.136 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_245 0.038 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_288 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_291 0.031 Gene family Compare
Vitis vinifera HCCA cluster Cluster_2 0.047 Gene family Compare
Vitis vinifera HCCA cluster Cluster_55 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_95 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.119 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.067 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.071 Gene family Compare
Vitis vinifera HCCA cluster Cluster_212 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_45 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.053 Gene family Compare
Zea mays HCCA cluster Cluster_75 0.089 Gene family Compare
Zea mays HCCA cluster Cluster_111 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_163 0.072 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.036 Gene family Compare
Zea mays HCCA cluster Cluster_233 0.053 Gene family Compare
Zea mays HCCA cluster Cluster_246 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_258 0.167 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_297 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.02 Gene family Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms