Coexpression cluster: Cluster_173 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0070972 protein localization to endoplasmic reticulum 3.41% (3/88) 6.4 5e-06 0.000148
GO:0072594 establishment of protein localization to organelle 3.41% (3/88) 6.4 5e-06 0.000148
GO:0033365 protein localization to organelle 3.41% (3/88) 6.4 5e-06 0.000148
GO:0045047 protein targeting to ER 3.41% (3/88) 6.4 5e-06 0.000148
GO:0072599 establishment of protein localization to endoplasmic reticulum 3.41% (3/88) 6.4 5e-06 0.000148
GO:0072657 protein localization to membrane 3.41% (3/88) 6.26 7e-06 0.000152
GO:0090150 establishment of protein localization to membrane 3.41% (3/88) 6.26 7e-06 0.000152
GO:0006605 protein targeting 3.41% (3/88) 6.26 7e-06 0.000152
GO:0070727 cellular macromolecule localization 3.41% (3/88) 6.02 1.2e-05 0.000224
GO:0034613 cellular protein localization 3.41% (3/88) 6.02 1.2e-05 0.000224
GO:0006612 protein targeting to membrane 3.41% (3/88) 6.55 4e-06 0.000233
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 3.41% (3/88) 6.55 4e-06 0.000233
GO:0006613 cotranslational protein targeting to membrane 3.41% (3/88) 6.55 4e-06 0.000233
GO:0032991 protein-containing complex 9.09% (8/88) 2.82 1.8e-05 0.000313
GO:0006886 intracellular protein transport 4.55% (4/88) 4.64 2e-05 0.000323
GO:0042886 amide transport 4.55% (4/88) 4.33 4.8e-05 0.000589
GO:0046907 intracellular transport 4.55% (4/88) 4.33 4.8e-05 0.000589
GO:0015031 protein transport 4.55% (4/88) 4.33 4.8e-05 0.000589
GO:0015833 peptide transport 4.55% (4/88) 4.33 4.8e-05 0.000589
GO:0051649 establishment of localization in cell 4.55% (4/88) 4.33 4.8e-05 0.000589
GO:0005575 cellular_component 18.18% (16/88) 1.98 2e-06 0.00062
GO:0033036 macromolecule localization 4.55% (4/88) 4.25 5.9e-05 0.000633
GO:0008104 protein localization 4.55% (4/88) 4.25 5.9e-05 0.000633
GO:0045184 establishment of protein localization 4.55% (4/88) 4.27 5.5e-05 0.000646
GO:0048500 signal recognition particle 2.27% (2/88) 7.13 7.5e-05 0.000744
GO:0008312 7S RNA binding 2.27% (2/88) 7.13 7.5e-05 0.000744
GO:0051641 cellular localization 4.55% (4/88) 4.09 9.2e-05 0.000875
GO:0071705 nitrogen compound transport 4.55% (4/88) 3.9 0.000151 0.001388
GO:0006479 protein methylation 2.27% (2/88) 6.55 0.000186 0.001604
GO:0008213 protein alkylation 2.27% (2/88) 6.55 0.000186 0.001604
GO:0071702 organic substance transport 4.55% (4/88) 3.76 0.000223 0.001855
GO:0009987 cellular process 21.59% (19/88) 1.19 0.000472 0.003802
GO:0008150 biological_process 25.0% (22/88) 1.06 0.000541 0.004229
GO:0036211 protein modification process 7.95% (7/88) 2.25 0.000679 0.004734
GO:0006464 cellular protein modification process 7.95% (7/88) 2.25 0.000679 0.004734
GO:0006820 anion transport 4.55% (4/88) 3.35 0.000651 0.004941
GO:0043414 macromolecule methylation 2.27% (2/88) 5.67 0.000676 0.004982
GO:0043412 macromolecule modification 7.95% (7/88) 2.16 0.000996 0.006765
GO:0042592 homeostatic process 3.41% (3/88) 3.79 0.001354 0.008959
GO:0031090 organelle membrane 2.27% (2/88) 4.96 0.00185 0.01164
GO:0032259 methylation 2.27% (2/88) 4.96 0.00185 0.01164
GO:0065008 regulation of biological quality 3.41% (3/88) 3.59 0.002013 0.012077
GO:0044267 cellular protein metabolic process 7.95% (7/88) 1.99 0.001975 0.012134
GO:1990904 ribonucleoprotein complex 2.27% (2/88) 4.74 0.002521 0.014785
GO:0004583 dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity 1.14% (1/88) 8.13 0.003562 0.015067
GO:0005047 signal recognition particle binding 1.14% (1/88) 8.13 0.003562 0.015067
GO:0005747 mitochondrial respiratory chain complex I 1.14% (1/88) 8.13 0.003562 0.015067
GO:0031965 nuclear membrane 1.14% (1/88) 8.13 0.003562 0.015067
GO:0045271 respiratory chain complex I 1.14% (1/88) 8.13 0.003562 0.015067
GO:0030964 NADH dehydrogenase complex 1.14% (1/88) 8.13 0.003562 0.015067
GO:0055088 lipid homeostasis 1.14% (1/88) 8.13 0.003562 0.015067
GO:0030119 AP-type membrane coat adaptor complex 1.14% (1/88) 8.13 0.003562 0.015067
GO:0034968 histone lysine methylation 1.14% (1/88) 8.13 0.003562 0.015067
GO:0005849 mRNA cleavage factor complex 1.14% (1/88) 8.13 0.003562 0.015067
GO:0006378 mRNA polyadenylation 1.14% (1/88) 8.13 0.003562 0.015067
GO:0030131 clathrin adaptor complex 1.14% (1/88) 8.13 0.003562 0.015067
GO:0018022 peptidyl-lysine methylation 1.14% (1/88) 8.13 0.003562 0.015067
GO:0016571 histone methylation 1.14% (1/88) 8.13 0.003562 0.015067
GO:0110165 cellular anatomical entity 10.23% (9/88) 1.55 0.003672 0.01528
GO:0016021 integral component of membrane 5.68% (5/88) 2.27 0.003931 0.015847
GO:0031224 intrinsic component of membrane 5.68% (5/88) 2.27 0.003931 0.015847
GO:0043170 macromolecule metabolic process 12.5% (11/88) 1.4 0.002967 0.016643
GO:0098796 membrane protein complex 3.41% (3/88) 3.4 0.002945 0.016884
GO:0008168 methyltransferase activity 3.41% (3/88) 3.15 0.004775 0.018952
GO:0019538 protein metabolic process 9.09% (8/88) 1.68 0.003507 0.01925
GO:0044237 cellular metabolic process 13.64% (12/88) 1.22 0.005187 0.019973
GO:0018193 peptidyl-amino acid modification 2.27% (2/88) 4.23 0.005115 0.019997
GO:1901564 organonitrogen compound metabolic process 10.23% (9/88) 1.46 0.005472 0.02076
GO:0016741 transferase activity, transferring one-carbon groups 3.41% (3/88) 3.06 0.005662 0.021169
GO:0031124 mRNA 3'-end processing 1.14% (1/88) 7.13 0.007112 0.023228
GO:0005869 dynactin complex 1.14% (1/88) 7.13 0.007112 0.023228
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process 1.14% (1/88) 7.13 0.007112 0.023228
GO:0030942 endoplasmic reticulum signal peptide binding 1.14% (1/88) 7.13 0.007112 0.023228
GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity 1.14% (1/88) 7.13 0.007112 0.023228
GO:0048878 chemical homeostasis 1.14% (1/88) 7.13 0.007112 0.023228
GO:0005786 signal recognition particle, endoplasmic reticulum targeting 1.14% (1/88) 7.13 0.007112 0.023228
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 1.14% (1/88) 7.13 0.007112 0.023228
GO:0043631 RNA polyadenylation 1.14% (1/88) 7.13 0.007112 0.023228
GO:0022904 respiratory electron transport chain 1.14% (1/88) 7.13 0.007112 0.023228
GO:0016740 transferase activity 9.09% (8/88) 1.48 0.007926 0.025562
GO:0044260 cellular macromolecule metabolic process 9.09% (8/88) 1.48 0.008097 0.025791
GO:0044238 primary metabolic process 13.64% (12/88) 1.11 0.009018 0.028374
GO:0003676 nucleic acid binding 7.95% (7/88) 1.57 0.009324 0.028983
GO:0004576 oligosaccharyl transferase activity 1.14% (1/88) 6.55 0.01065 0.029866
GO:0043021 ribonucleoprotein complex binding 1.14% (1/88) 6.55 0.01065 0.029866
GO:0042277 peptide binding 1.14% (1/88) 6.55 0.01065 0.029866
GO:0006480 N-terminal protein amino acid methylation 1.14% (1/88) 6.55 0.01065 0.029866
GO:0008250 oligosaccharyltransferase complex 1.14% (1/88) 6.55 0.01065 0.029866
GO:0031365 N-terminal protein amino acid modification 1.14% (1/88) 6.55 0.01065 0.029866
GO:0005048 signal sequence binding 1.14% (1/88) 6.55 0.01065 0.029866
GO:0031123 RNA 3'-end processing 1.14% (1/88) 6.55 0.01065 0.029866
GO:0098803 respiratory chain complex 1.14% (1/88) 6.55 0.01065 0.029866
GO:0003723 RNA binding 3.41% (3/88) 2.71 0.011058 0.030677
GO:0016758 transferase activity, transferring hexosyl groups 2.27% (2/88) 3.61 0.011731 0.032198
GO:0008152 metabolic process 14.77% (13/88) 1.01 0.0119 0.032319
GO:0006807 nitrogen compound metabolic process 12.5% (11/88) 1.1 0.012933 0.034757
GO:0003729 mRNA binding 1.14% (1/88) 6.13 0.014175 0.037317
GO:0022900 electron transport chain 1.14% (1/88) 6.13 0.014175 0.037317
GO:0019725 cellular homeostasis 2.27% (2/88) 3.4 0.01537 0.039262
GO:0045454 cell redox homeostasis 2.27% (2/88) 3.4 0.01537 0.039262
GO:0071704 organic substance metabolic process 13.64% (12/88) 1.01 0.015178 0.039554
GO:0140513 nuclear protein-containing complex 2.27% (2/88) 3.38 0.015925 0.04028
GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity 1.14% (1/88) 5.81 0.017687 0.04346
GO:0098800 inner mitochondrial membrane protein complex 1.14% (1/88) 5.81 0.017687 0.04346
GO:0015924 mannosyl-oligosaccharide mannosidase activity 1.14% (1/88) 5.81 0.017687 0.04346
GO:0006811 ion transport 4.55% (4/88) 1.98 0.01878 0.045711
GO:0016570 histone modification 1.14% (1/88) 5.55 0.021187 0.046721
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 1.14% (1/88) 5.55 0.021187 0.046721
GO:0098798 mitochondrial protein-containing complex 1.14% (1/88) 5.55 0.021187 0.046721
GO:0046527 glucosyltransferase activity 1.14% (1/88) 5.55 0.021187 0.046721
GO:0005789 endoplasmic reticulum membrane 1.14% (1/88) 5.55 0.021187 0.046721
GO:0004559 alpha-mannosidase activity 1.14% (1/88) 5.55 0.021187 0.046721
GO:0008094 DNA-dependent ATPase activity 1.14% (1/88) 5.55 0.021187 0.046721
GO:0016569 covalent chromatin modification 1.14% (1/88) 5.55 0.021187 0.046721
GO:0015923 mannosidase activity 1.14% (1/88) 5.55 0.021187 0.046721
GO:0018205 peptidyl-lysine modification 1.14% (1/88) 5.55 0.021187 0.046721
GO:0003674 molecular_function 30.68% (27/88) 0.55 0.02027 0.048876
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_169 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_177 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_191 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_150 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.033 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_130 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_64 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_68 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_9 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_165 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_339 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_234 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_356 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_53 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_269 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_203 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_264 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_288 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_326 0.021 Archaeplastida Compare
Sequences (88) (download table)

InterPro Domains

GO Terms

Family Terms