Coexpression cluster: Cluster_237 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 8.33% (8/96) 4.76 0.0 0.0
GO:0090304 nucleic acid metabolic process 11.46% (11/96) 3.36 0.0 1e-06
GO:0006270 DNA replication initiation 4.17% (4/96) 7.24 0.0 1e-06
GO:0006725 cellular aromatic compound metabolic process 12.5% (12/96) 2.9 0.0 3e-06
GO:0046483 heterocycle metabolic process 12.5% (12/96) 2.92 0.0 4e-06
GO:1901360 organic cyclic compound metabolic process 12.5% (12/96) 2.86 0.0 4e-06
GO:0006139 nucleobase-containing compound metabolic process 11.46% (11/96) 2.94 0.0 7e-06
GO:0034641 cellular nitrogen compound metabolic process 12.5% (12/96) 2.37 4e-06 0.000101
GO:0003677 DNA binding 11.46% (11/96) 2.44 6e-06 0.00015
GO:0003676 nucleic acid binding 12.5% (12/96) 1.65 0.000421 0.009187
GO:0044427 chromosomal part 3.12% (3/96) 4.12 0.000711 0.010331
GO:0051716 cellular response to stimulus 3.12% (3/96) 4.14 0.000682 0.010627
GO:0006974 cellular response to DNA damage stimulus 3.12% (3/96) 4.14 0.000682 0.010627
GO:0033554 cellular response to stress 3.12% (3/96) 4.14 0.000682 0.010627
GO:0006281 DNA repair 3.12% (3/96) 4.2 0.000602 0.011921
GO:0044424 intracellular part 9.38% (9/96) 1.64 0.002462 0.028244
GO:0008541 proteasome regulatory particle, lid subcomplex 1.04% (1/96) 8.7 0.002403 0.029099
GO:0036260 RNA capping 1.04% (1/96) 8.7 0.002403 0.029099
GO:0009452 7-methylguanosine RNA capping 1.04% (1/96) 8.7 0.002403 0.029099
GO:0009451 RNA modification 2.08% (2/96) 4.66 0.002874 0.031322
GO:0044260 cellular macromolecule metabolic process 12.5% (12/96) 1.29 0.00368 0.036464
GO:0044464 cell part 9.38% (9/96) 1.56 0.003577 0.037135
GO:0030915 Smc5-Smc6 complex 1.04% (1/96) 7.7 0.0048 0.038753
GO:0046653 tetrahydrofolate metabolic process 1.04% (1/96) 7.7 0.0048 0.038753
GO:0106068 SUMO ligase complex 1.04% (1/96) 7.7 0.0048 0.038753
GO:0046654 tetrahydrofolate biosynthetic process 1.04% (1/96) 7.7 0.0048 0.038753
GO:0004146 dihydrofolate reductase activity 1.04% (1/96) 7.7 0.0048 0.038753
GO:0051168 nuclear export 1.04% (1/96) 7.12 0.007191 0.040196
GO:0051028 mRNA transport 1.04% (1/96) 7.12 0.007191 0.040196
GO:0051236 establishment of RNA localization 1.04% (1/96) 7.12 0.007191 0.040196
GO:0006406 mRNA export from nucleus 1.04% (1/96) 7.12 0.007191 0.040196
GO:0006405 RNA export from nucleus 1.04% (1/96) 7.12 0.007191 0.040196
GO:0009396 folic acid-containing compound biosynthetic process 1.04% (1/96) 7.12 0.007191 0.040196
GO:0050657 nucleic acid transport 1.04% (1/96) 7.12 0.007191 0.040196
GO:0050658 RNA transport 1.04% (1/96) 7.12 0.007191 0.040196
GO:0005634 nucleus 4.17% (4/96) 2.52 0.005354 0.041683
GO:0043227 membrane-bounded organelle 4.17% (4/96) 2.35 0.008029 0.04269
GO:0043231 intracellular membrane-bounded organelle 4.17% (4/96) 2.35 0.008029 0.04269
GO:0006807 nitrogen compound metabolic process 14.58% (14/96) 1.02 0.008462 0.043923
GO:0043248 proteasome assembly 1.04% (1/96) 6.7 0.009577 0.046393
GO:0033588 Elongator holoenzyme complex 1.04% (1/96) 6.7 0.009577 0.046393
GO:0042559 pteridine-containing compound biosynthetic process 1.04% (1/96) 6.7 0.009577 0.046393
GO:0043170 macromolecule metabolic process 13.54% (13/96) 1.05 0.009882 0.04683
GO:0032993 protein-DNA complex 2.08% (2/96) 4.06 0.006493 0.047179
GO:0000786 nucleosome 2.08% (2/96) 4.06 0.006493 0.047179
GO:0044815 DNA packaging complex 2.08% (2/96) 4.03 0.006747 0.047447
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_15 0.033 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_70 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_82 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_156 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_196 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_199 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_200 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_203 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_249 0.036 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_254 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_49 0.027 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_114 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_25 0.033 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_75 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_16 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_32 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_71 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_76 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_78 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_96 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_133 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_151 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_217 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_227 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_255 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_274 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_291 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_300 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_27 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_87 0.038 Gene family Compare
Picea abies HCCA cluster Cluster_136 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_288 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_289 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_181 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.051 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_195 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_212 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_232 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_261 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.051 Gene family Compare
Vitis vinifera HCCA cluster Cluster_158 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_159 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_236 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_1 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_27 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_32 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.057 Gene family Compare
Zea mays HCCA cluster Cluster_56 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_183 0.037 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_197 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_280 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_288 0.053 Gene family Compare
Zea mays HCCA cluster Cluster_316 0.015 Gene family Compare
Sequences (96) (download table)

InterPro Domains

GO Terms

Family Terms