Coexpression cluster: Cluster_142 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006518 peptide metabolic process 6.85% (5/73) 4.19 8e-06 0.000188
GO:0043603 cellular amide metabolic process 6.85% (5/73) 4.14 1e-05 0.000192
GO:0043228 non-membrane-bounded organelle 6.85% (5/73) 4.07 1.2e-05 0.000197
GO:0043232 intracellular non-membrane-bounded organelle 6.85% (5/73) 4.07 1.2e-05 0.000197
GO:0043604 amide biosynthetic process 6.85% (5/73) 4.22 7e-06 0.000197
GO:0005198 structural molecule activity 6.85% (5/73) 4.23 7e-06 0.000224
GO:0003735 structural constituent of ribosome 6.85% (5/73) 4.37 4e-06 0.000236
GO:0043043 peptide biosynthetic process 6.85% (5/73) 4.25 7e-06 0.000265
GO:0006412 translation 6.85% (5/73) 4.38 4e-06 0.000333
GO:0009059 macromolecule biosynthetic process 8.22% (6/73) 3.35 2.8e-05 0.000396
GO:0110165 cellular anatomical entity 15.07% (11/73) 2.11 4.5e-05 0.000588
GO:0005840 ribosome 6.85% (5/73) 4.42 4e-06 0.000589
GO:0034645 cellular macromolecule biosynthetic process 6.85% (5/73) 3.31 0.000154 0.001871
GO:0009058 biosynthetic process 10.96% (8/73) 2.35 0.000171 0.001926
GO:0043226 organelle 6.85% (5/73) 3.12 0.000283 0.002631
GO:0043229 intracellular organelle 6.85% (5/73) 3.13 0.00027 0.002666
GO:1901566 organonitrogen compound biosynthetic process 6.85% (5/73) 3.13 0.00027 0.002666
GO:0005575 cellular_component 15.07% (11/73) 1.71 0.000496 0.003916
GO:0044271 cellular nitrogen compound biosynthetic process 8.22% (6/73) 2.6 0.000479 0.003986
GO:0005622 intracellular anatomical structure 6.85% (5/73) 2.96 0.000462 0.004055
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 1.37% (1/73) 8.4 0.002955 0.018677
GO:0005542 folic acid binding 1.37% (1/73) 8.4 0.002955 0.018677
GO:0072341 modified amino acid binding 1.37% (1/73) 8.4 0.002955 0.018677
GO:0051499 D-aminoacyl-tRNA deacylase activity 1.37% (1/73) 8.4 0.002955 0.018677
GO:0016741 transferase activity, transferring one-carbon groups 4.11% (3/73) 3.33 0.003354 0.019625
GO:1901576 organic substance biosynthetic process 8.22% (6/73) 2.05 0.003277 0.019915
GO:0044249 cellular biosynthetic process 8.22% (6/73) 2.09 0.002842 0.021381
GO:0002161 aminoacyl-tRNA editing activity 1.37% (1/73) 7.4 0.005902 0.02914
GO:0008521 acetyl-CoA transmembrane transporter activity 1.37% (1/73) 7.4 0.005902 0.02914
GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity 1.37% (1/73) 7.4 0.005902 0.02914
GO:0042887 amide transmembrane transporter activity 1.37% (1/73) 7.4 0.005902 0.02914
GO:0034641 cellular nitrogen compound metabolic process 9.59% (7/73) 1.66 0.006698 0.032069
GO:0003674 molecular_function 34.25% (25/73) 0.71 0.005754 0.032467
GO:0005737 cytoplasm 2.74% (2/73) 3.82 0.0089 0.041358
GO:0031406 carboxylic acid binding 1.37% (1/73) 6.4 0.011769 0.045355
GO:0031968 organelle outer membrane 1.37% (1/73) 6.4 0.011769 0.045355
GO:0005741 mitochondrial outer membrane 1.37% (1/73) 6.4 0.011769 0.045355
GO:0043177 organic acid binding 1.37% (1/73) 6.4 0.011769 0.045355
GO:0004427 inorganic diphosphatase activity 1.37% (1/73) 6.4 0.011769 0.045355
GO:0098588 bounding membrane of organelle 1.37% (1/73) 6.4 0.011769 0.045355
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 1.37% (1/73) 6.4 0.011769 0.045355
GO:0003824 catalytic activity 19.18% (14/73) 0.94 0.012137 0.045657
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_7 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_130 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_34 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_57 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_58 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_116 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_251 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_35 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_169 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_2 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_229 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_250 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_133 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_179 0.023 Archaeplastida Compare
Sequences (73) (download table)

InterPro Domains

GO Terms

Family Terms