Coexpression cluster: Cluster_117 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0097747 RNA polymerase activity 3.54% (4/113) 4.87 1e-05 0.000654
GO:0034062 5'-3' RNA polymerase activity 3.54% (4/113) 4.87 1e-05 0.000654
GO:0032774 RNA biosynthetic process 4.42% (5/113) 4.03 1.4e-05 0.000667
GO:0044260 cellular macromolecule metabolic process 12.39% (14/113) 1.92 1.9e-05 0.000733
GO:0097659 nucleic acid-templated transcription 3.54% (4/113) 4.49 3e-05 0.000815
GO:0006351 transcription, DNA-templated 3.54% (4/113) 4.49 3e-05 0.000815
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 3.54% (4/113) 5.02 7e-06 0.00127
GO:0043170 macromolecule metabolic process 14.16% (16/113) 1.58 8.7e-05 0.002061
GO:0090304 nucleic acid metabolic process 7.96% (9/113) 2.21 0.000147 0.003088
GO:0003677 DNA binding 6.19% (7/113) 2.51 0.000243 0.003827
GO:0006302 double-strand break repair 1.77% (2/113) 6.45 0.000206 0.003885
GO:0050896 response to stimulus 4.42% (5/113) 3.19 0.00023 0.003949
GO:0006807 nitrogen compound metabolic process 15.04% (17/113) 1.37 0.000282 0.004099
GO:0009059 macromolecule biosynthetic process 5.31% (6/113) 2.72 0.000313 0.00423
GO:0016779 nucleotidyltransferase activity 3.54% (4/113) 3.51 0.000434 0.005474
GO:0034641 cellular nitrogen compound metabolic process 9.73% (11/113) 1.68 0.000666 0.007865
GO:0051716 cellular response to stimulus 3.54% (4/113) 3.17 0.001037 0.008909
GO:0033554 cellular response to stress 3.54% (4/113) 3.17 0.001037 0.008909
GO:0006974 cellular response to DNA damage stimulus 3.54% (4/113) 3.17 0.001037 0.008909
GO:0044271 cellular nitrogen compound biosynthetic process 6.19% (7/113) 2.19 0.000912 0.009073
GO:0034645 cellular macromolecule biosynthetic process 4.42% (5/113) 2.68 0.001152 0.009469
GO:0044237 cellular metabolic process 14.16% (16/113) 1.27 0.000909 0.009542
GO:0006281 DNA repair 3.54% (4/113) 3.23 0.000886 0.009853
GO:0071704 organic substance metabolic process 15.04% (17/113) 1.15 0.001527 0.011099
GO:0008152 metabolic process 15.93% (18/113) 1.12 0.001482 0.011204
GO:0006950 response to stress 3.54% (4/113) 3.04 0.001441 0.011346
GO:0044238 primary metabolic process 14.16% (16/113) 1.17 0.001914 0.013399
GO:0016772 transferase activity, transferring phosphorus-containing groups 7.08% (8/113) 1.81 0.002135 0.014409
GO:0006139 nucleobase-containing compound metabolic process 7.96% (9/113) 1.66 0.002226 0.014509
GO:0034654 nucleobase-containing compound biosynthetic process 4.42% (5/113) 2.37 0.002946 0.018558
GO:0006725 cellular aromatic compound metabolic process 7.96% (9/113) 1.57 0.003404 0.01892
GO:0140098 catalytic activity, acting on RNA 3.54% (4/113) 2.71 0.003378 0.019346
GO:0003676 nucleic acid binding 7.96% (9/113) 1.57 0.00337 0.019904
GO:0016740 transferase activity 8.85% (10/113) 1.44 0.003846 0.020194
GO:0046483 heterocycle metabolic process 7.96% (9/113) 1.58 0.003337 0.020343
GO:1901360 organic cyclic compound metabolic process 7.96% (9/113) 1.55 0.003791 0.020471
GO:0006303 double-strand break repair via nonhomologous end joining 0.88% (1/113) 7.77 0.004575 0.022169
GO:0000726 non-recombinational repair 0.88% (1/113) 7.77 0.004575 0.022169
GO:0016070 RNA metabolic process 4.42% (5/113) 2.22 0.00448 0.022885
GO:0018130 heterocycle biosynthetic process 4.42% (5/113) 2.15 0.005616 0.025891
GO:0019438 aromatic compound biosynthetic process 4.42% (5/113) 2.15 0.005522 0.026094
GO:0044249 cellular biosynthetic process 6.19% (7/113) 1.68 0.00633 0.028484
GO:1901362 organic cyclic compound biosynthetic process 4.42% (5/113) 2.08 0.006726 0.029563
GO:1901576 organic substance biosynthetic process 6.19% (7/113) 1.64 0.007372 0.031666
GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity 0.88% (1/113) 6.77 0.009128 0.034505
GO:0034464 BBSome 0.88% (1/113) 6.77 0.009128 0.034505
GO:0019748 secondary metabolic process 0.88% (1/113) 6.77 0.009128 0.034505
GO:0044550 secondary metabolite biosynthetic process 0.88% (1/113) 6.77 0.009128 0.034505
GO:0046938 phytochelatin biosynthetic process 0.88% (1/113) 6.77 0.009128 0.034505
GO:0046937 phytochelatin metabolic process 0.88% (1/113) 6.77 0.009128 0.034505
GO:0009058 biosynthetic process 6.19% (7/113) 1.53 0.011158 0.041351
GO:0006259 DNA metabolic process 3.54% (4/113) 2.19 0.011805 0.042907
GO:0006310 DNA recombination 1.77% (2/113) 3.56 0.012445 0.044379
GO:0010038 response to metal ion 0.88% (1/113) 6.19 0.013662 0.046946
GO:0010035 response to inorganic substance 0.88% (1/113) 6.19 0.013662 0.046946
GO:0097159 organic cyclic compound binding 12.39% (14/113) 0.94 0.014462 0.047953
GO:1901363 heterocyclic compound binding 12.39% (14/113) 0.94 0.014462 0.047953
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Cyanophora paradoxa HCCA Cluster_19 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_51 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_102 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_147 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_151 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_167 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_208 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_174 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_87 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.02 Archaeplastida Compare
Sequences (113) (download table)

InterPro Domains

GO Terms

Family Terms