Coexpression cluster: Cluster_243 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034641 cellular nitrogen compound metabolic process 25.53% (12/47) 3.4 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 19.15% (9/47) 4.14 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 21.28% (10/47) 3.93 0.0 0.0
GO:0009059 macromolecule biosynthetic process 19.15% (9/47) 4.02 0.0 0.0
GO:0044444 cytoplasmic part 19.15% (9/47) 3.85 0.0 1e-06
GO:0005198 structural molecule activity 14.89% (7/47) 4.29 0.0 1e-06
GO:0043228 non-membrane-bounded organelle 14.89% (7/47) 4.29 0.0 1e-06
GO:0043232 intracellular non-membrane-bounded organelle 14.89% (7/47) 4.29 0.0 1e-06
GO:1990904 ribonucleoprotein complex 14.89% (7/47) 4.27 0.0 1e-06
GO:1901576 organic substance biosynthetic process 21.28% (10/47) 3.33 0.0 1e-06
GO:0043043 peptide biosynthetic process 14.89% (7/47) 4.35 0.0 1e-06
GO:0043603 cellular amide metabolic process 14.89% (7/47) 4.25 0.0 1e-06
GO:0043604 amide biosynthetic process 14.89% (7/47) 4.31 0.0 1e-06
GO:0044249 cellular biosynthetic process 21.28% (10/47) 3.4 0.0 1e-06
GO:0003735 structural constituent of ribosome 14.89% (7/47) 4.38 0.0 1e-06
GO:0005840 ribosome 14.89% (7/47) 4.43 0.0 1e-06
GO:0006518 peptide metabolic process 14.89% (7/47) 4.31 0.0 1e-06
GO:0006412 translation 14.89% (7/47) 4.39 0.0 1e-06
GO:1901566 organonitrogen compound biosynthetic process 17.02% (8/47) 3.79 0.0 1e-06
GO:0009058 biosynthetic process 21.28% (10/47) 3.17 0.0 1e-06
GO:0032991 protein-containing complex 19.15% (9/47) 3.27 0.0 4e-06
GO:0043226 organelle 17.02% (8/47) 3.43 1e-06 7e-06
GO:0043229 intracellular organelle 17.02% (8/47) 3.43 1e-06 7e-06
GO:0008150 biological_process 48.94% (23/47) 1.36 4e-06 3.7e-05
GO:0044237 cellular metabolic process 29.79% (14/47) 2.0 5e-06 4.6e-05
GO:0008152 metabolic process 38.3% (18/47) 1.59 8e-06 7.3e-05
GO:0044424 intracellular part 19.15% (9/47) 2.67 1e-05 8.3e-05
GO:0044464 cell part 19.15% (9/47) 2.59 1.5e-05 0.000126
GO:0005575 cellular_component 25.53% (12/47) 1.96 3.8e-05 0.00031
GO:0009987 cellular process 29.79% (14/47) 1.73 4.4e-05 0.000344
GO:0008324 cation transmembrane transporter activity 8.51% (4/47) 4.22 6.5e-05 0.000492
GO:0015078 proton transmembrane transporter activity 6.38% (3/47) 5.21 7.6e-05 0.000553
GO:0006807 nitrogen compound metabolic process 25.53% (12/47) 1.83 8.8e-05 0.000627
GO:0044238 primary metabolic process 27.66% (13/47) 1.65 0.000153 0.001051
GO:0043170 macromolecule metabolic process 23.4% (11/47) 1.84 0.000182 0.001215
GO:0015077 monovalent inorganic cation transmembrane transporter activity 6.38% (3/47) 4.73 0.000202 0.001312
GO:0071704 organic substance metabolic process 27.66% (13/47) 1.59 0.000223 0.001413
GO:0015075 ion transmembrane transporter activity 8.51% (4/47) 3.71 0.000247 0.001522
GO:0016651 oxidoreductase activity, acting on NAD(P)H 4.26% (2/47) 6.09 0.000399 0.002396
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 4.26% (2/47) 5.98 0.000467 0.002729
GO:0044260 cellular macromolecule metabolic process 19.15% (9/47) 1.9 0.000558 0.003182
GO:0016070 RNA metabolic process 8.51% (4/47) 3.38 0.000589 0.003203
GO:0006397 mRNA processing 4.26% (2/47) 5.82 0.000577 0.003214
GO:0006139 nucleobase-containing compound metabolic process 10.64% (5/47) 2.83 0.000669 0.003559
GO:0022890 inorganic cation transmembrane transporter activity 6.38% (3/47) 4.06 0.000789 0.004103
GO:0016071 mRNA metabolic process 4.26% (2/47) 5.56 0.000832 0.004231
GO:0046483 heterocycle metabolic process 10.64% (5/47) 2.68 0.001055 0.005252
GO:0015980 energy derivation by oxidation of organic compounds 2.13% (1/47) 9.73 0.001176 0.005397
GO:0045333 cellular respiration 2.13% (1/47) 9.73 0.001176 0.005397
GO:0009060 aerobic respiration 2.13% (1/47) 9.73 0.001176 0.005397
GO:0006725 cellular aromatic compound metabolic process 10.64% (5/47) 2.67 0.00112 0.00546
GO:1901360 organic cyclic compound metabolic process 10.64% (5/47) 2.63 0.001259 0.005667
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 4.26% (2/47) 5.15 0.001476 0.006516
GO:0097747 RNA polymerase activity 4.26% (2/47) 5.0 0.001796 0.007642
GO:0034062 5'-3' RNA polymerase activity 4.26% (2/47) 5.0 0.001796 0.007642
GO:0090304 nucleic acid metabolic process 8.51% (4/47) 2.93 0.001885 0.007877
GO:0034654 nucleobase-containing compound biosynthetic process 6.38% (3/47) 3.59 0.002011 0.008255
GO:0009733 response to auxin 4.26% (2/47) 4.85 0.00222 0.008806
GO:1902600 proton transmembrane transport 4.26% (2/47) 4.85 0.00222 0.008806
GO:0015318 inorganic molecular entity transmembrane transporter activity 6.38% (3/47) 3.49 0.002441 0.009518
GO:0009725 response to hormone 4.26% (2/47) 4.6 0.003108 0.011545
GO:0009719 response to endogenous stimulus 4.26% (2/47) 4.6 0.003108 0.011545
GO:0010033 response to organic substance 4.26% (2/47) 4.6 0.003108 0.011545
GO:0044267 cellular protein metabolic process 14.89% (7/47) 1.83 0.003273 0.011966
GO:0018130 heterocycle biosynthetic process 6.38% (3/47) 3.29 0.003575 0.012487
GO:0097659 nucleic acid-templated transcription 4.26% (2/47) 4.5 0.003558 0.012616
GO:0006351 transcription, DNA-templated 4.26% (2/47) 4.5 0.003558 0.012616
GO:0019438 aromatic compound biosynthetic process 6.38% (3/47) 3.27 0.003731 0.01284
GO:0006812 cation transport 6.38% (3/47) 3.22 0.004097 0.013896
GO:0042221 response to chemical 4.26% (2/47) 4.36 0.004338 0.0145
GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor 2.13% (1/47) 7.73 0.004697 0.014853
GO:0016675 oxidoreductase activity, acting on a heme group of donors 2.13% (1/47) 7.73 0.004697 0.014853
GO:0015002 heme-copper terminal oxidase activity 2.13% (1/47) 7.73 0.004697 0.014853
GO:0004129 cytochrome-c oxidase activity 2.13% (1/47) 7.73 0.004697 0.014853
GO:1901362 organic cyclic compound biosynthetic process 6.38% (3/47) 3.14 0.004847 0.015122
GO:0015672 monovalent inorganic cation transport 4.26% (2/47) 4.21 0.0053 0.016318
GO:0098660 inorganic ion transmembrane transport 4.26% (2/47) 4.13 0.005873 0.017178
GO:0098662 inorganic cation transmembrane transport 4.26% (2/47) 4.13 0.005873 0.017178
GO:0098655 cation transmembrane transport 4.26% (2/47) 4.13 0.005873 0.017178
GO:0022857 transmembrane transporter activity 8.51% (4/47) 2.47 0.005841 0.017751
GO:0005215 transporter activity 8.51% (4/47) 2.42 0.006638 0.019176
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 2.13% (1/47) 7.15 0.007038 0.019841
GO:1901564 organonitrogen compound metabolic process 17.02% (8/47) 1.48 0.007019 0.020029
GO:0034220 ion transmembrane transport 4.26% (2/47) 3.98 0.007229 0.020137
GO:0032774 RNA biosynthetic process 4.26% (2/47) 3.92 0.007754 0.021345
GO:0016779 nucleotidyltransferase activity 4.26% (2/47) 3.91 0.007887 0.021461
GO:0006811 ion transport 6.38% (3/47) 2.84 0.008578 0.023071
GO:0006396 RNA processing 4.26% (2/47) 3.75 0.009721 0.025849
GO:0019538 protein metabolic process 14.89% (7/47) 1.51 0.010448 0.02747
GO:0005739 mitochondrion 2.13% (1/47) 6.41 0.011702 0.030426
GO:0016157 sucrose synthase activity 2.13% (1/47) 6.27 0.012865 0.033082
GO:0003954 NADH dehydrogenase activity 2.13% (1/47) 6.15 0.014027 0.03455
GO:0050136 NADH dehydrogenase (quinone) activity 2.13% (1/47) 6.15 0.014027 0.03455
GO:0048038 quinone binding 2.13% (1/47) 6.15 0.014027 0.03455
GO:0008137 NADH dehydrogenase (ubiquinone) activity 2.13% (1/47) 6.15 0.014027 0.03455
GO:0055114 oxidation-reduction process 10.64% (5/47) 1.77 0.015003 0.036569
GO:0005985 sucrose metabolic process 2.13% (1/47) 5.92 0.016346 0.039432
GO:0044425 membrane part 8.51% (4/47) 2.02 0.016864 0.040268
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.13% (1/47) 5.82 0.017503 0.040958
GO:0003677 DNA binding 8.51% (4/47) 2.01 0.017332 0.040967
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 2.13% (1/47) 5.73 0.018659 0.043231
GO:0098796 membrane protein complex 4.26% (2/47) 3.23 0.019304 0.044286
GO:0099131 ATP hydrolysis coupled ion transmembrane transport 2.13% (1/47) 5.56 0.020968 0.045013
GO:0044455 mitochondrial membrane part 2.13% (1/47) 5.56 0.020968 0.045013
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient 2.13% (1/47) 5.56 0.020968 0.045013
GO:0090662 ATP hydrolysis coupled transmembrane transport 2.13% (1/47) 5.56 0.020968 0.045013
GO:0015991 ATP hydrolysis coupled proton transport 2.13% (1/47) 5.56 0.020968 0.045013
GO:0099132 ATP hydrolysis coupled cation transmembrane transport 2.13% (1/47) 5.56 0.020968 0.045013
GO:0098800 inner mitochondrial membrane protein complex 2.13% (1/47) 5.64 0.019814 0.045015
GO:0098798 mitochondrial protein complex 2.13% (1/47) 5.48 0.02212 0.047055
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_49 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_79 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_80 0.128 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_118 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_165 0.034 Gene family Compare
Oryza sativa HCCA cluster Cluster_60 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_83 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_89 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_91 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_107 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_143 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_279 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_326 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_257 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_28 0.111 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_52 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_2 0.055 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_3 0.032 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_4 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_110 0.065 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_113 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_120 0.043 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_132 0.054 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_154 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_191 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_220 0.062 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_233 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_11 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_12 0.063 Gene family Compare
Vitis vinifera HCCA cluster Cluster_187 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_39 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_93 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_279 0.02 Gene family Compare
Sequences (47) (download table)

InterPro Domains

GO Terms

Family Terms