Coexpression cluster: Cluster_57 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0098796 membrane protein complex 19.67% (12/61) 5.92 0.0 0.0
GO:0015979 photosynthesis 13.11% (8/61) 7.49 0.0 0.0
GO:0030076 light-harvesting complex 8.2% (5/61) 8.4 0.0 0.0
GO:0030089 phycobilisome 8.2% (5/61) 8.4 0.0 0.0
GO:0032991 protein-containing complex 19.67% (12/61) 3.93 0.0 0.0
GO:0009521 photosystem 8.2% (5/61) 7.4 0.0 0.0
GO:0009522 photosystem I 4.92% (3/61) 8.66 0.0 0.0
GO:0042548 regulation of photosynthesis, light reaction 4.92% (3/61) 8.25 0.0 1e-06
GO:0042549 photosystem II stabilization 4.92% (3/61) 8.25 0.0 1e-06
GO:0043467 regulation of generation of precursor metabolites and energy 4.92% (3/61) 8.25 0.0 1e-06
GO:0010109 regulation of photosynthesis 4.92% (3/61) 8.25 0.0 1e-06
GO:0005575 cellular_component 24.59% (15/61) 2.41 0.0 1e-06
GO:0009654 photosystem II oxygen evolving complex 4.92% (3/61) 6.79 2e-06 2.5e-05
GO:1990204 oxidoreductase complex 4.92% (3/61) 6.25 8e-06 7.8e-05
GO:0016491 oxidoreductase activity 11.48% (7/61) 3.08 1.9e-05 0.000165
GO:0010242 oxygen evolving activity 3.28% (2/61) 8.08 1.8e-05 0.000168
GO:0010207 photosystem II assembly 3.28% (2/61) 7.66 3.6e-05 0.000295
GO:0009987 cellular process 26.23% (16/61) 1.48 0.000123 0.000958
GO:0008150 biological_process 29.51% (18/61) 1.3 0.000191 0.001407
GO:0009523 photosystem II 3.28% (2/61) 6.49 0.000214 0.001495
GO:1902494 catalytic complex 4.92% (3/61) 3.96 0.000955 0.00637
GO:0034622 cellular protein-containing complex assembly 3.28% (2/61) 5.02 0.001735 0.01104
GO:0009055 electron transfer activity 3.28% (2/61) 4.85 0.002176 0.013243
GO:0009538 photosystem I reaction center 1.64% (1/61) 8.66 0.002469 0.014405
GO:0044237 cellular metabolic process 16.39% (10/61) 1.48 0.002712 0.015186
GO:0020037 heme binding 3.28% (2/61) 4.62 0.003015 0.016234
GO:0046906 tetrapyrrole binding 3.28% (2/61) 4.49 0.00358 0.018564
GO:0065003 protein-containing complex assembly 3.28% (2/61) 4.45 0.003779 0.018894
GO:0009507 chloroplast 1.64% (1/61) 7.66 0.004933 0.021581
GO:0009536 plastid 1.64% (1/61) 7.66 0.004933 0.021581
GO:0008152 metabolic process 18.03% (11/61) 1.29 0.00451 0.021773
GO:0110165 cellular anatomical entity 11.48% (7/61) 1.71 0.005315 0.022549
GO:0043933 protein-containing complex subunit organization 3.28% (2/61) 4.27 0.004847 0.022618
GO:0022607 cellular component assembly 3.28% (2/61) 4.08 0.00629 0.025899
GO:0019725 cellular homeostasis 3.28% (2/61) 3.93 0.007623 0.028085
GO:0045454 cell redox homeostasis 3.28% (2/61) 3.93 0.007623 0.028085
GO:0031323 regulation of cellular metabolic process 4.92% (3/61) 2.92 0.007418 0.028846
GO:0019222 regulation of metabolic process 4.92% (3/61) 2.87 0.008065 0.02895
GO:0030259 lipid glycosylation 1.64% (1/61) 7.08 0.00739 0.029561
GO:0042592 homeostatic process 3.28% (2/61) 3.73 0.009997 0.034988
GO:0065008 regulation of biological quality 3.28% (2/61) 3.53 0.013006 0.044412
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_99 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_18 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_77 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_170 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_178 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_229 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_282 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_11 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_152 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_247 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_279 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_91 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_313 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_131 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_125 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_285 0.024 Archaeplastida Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms