Coexpression cluster: Cluster_236 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043038 amino acid activation 9.09% (5/55) 6.1 0.0 1e-06
GO:0043039 tRNA aminoacylation 9.09% (5/55) 6.1 0.0 1e-06
GO:0006520 cellular amino acid metabolic process 10.91% (6/55) 5.09 0.0 1e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 9.09% (5/55) 6.13 0.0 1e-06
GO:0004812 aminoacyl-tRNA ligase activity 9.09% (5/55) 6.13 0.0 1e-06
GO:0006082 organic acid metabolic process 12.73% (7/55) 4.3 0.0 1e-06
GO:0044281 small molecule metabolic process 14.55% (8/55) 3.89 0.0 2e-06
GO:0140101 catalytic activity, acting on a tRNA 9.09% (5/55) 5.52 0.0 2e-06
GO:0043436 oxoacid metabolic process 12.73% (7/55) 4.31 0.0 2e-06
GO:0019752 carboxylic acid metabolic process 12.73% (7/55) 4.32 0.0 2e-06
GO:0006399 tRNA metabolic process 9.09% (5/55) 5.27 0.0 4e-06
GO:0016874 ligase activity 9.09% (5/55) 5.18 0.0 4e-06
GO:0006418 tRNA aminoacylation for protein translation 7.27% (4/55) 6.01 0.0 7e-06
GO:0034660 ncRNA metabolic process 9.09% (5/55) 4.99 1e-06 7e-06
GO:1901360 organic cyclic compound metabolic process 14.55% (8/55) 3.08 4e-06 5.6e-05
GO:0035639 purine ribonucleoside triphosphate binding 20.0% (11/55) 2.37 7e-06 8.5e-05
GO:0003824 catalytic activity 40.0% (22/55) 1.34 1.4e-05 0.000151
GO:0003674 molecular_function 60.0% (33/55) 0.89 2.3e-05 0.000245
GO:1901265 nucleoside phosphate binding 21.82% (12/55) 2.01 3.2e-05 0.000284
GO:0000166 nucleotide binding 21.82% (12/55) 2.01 3.2e-05 0.000284
GO:0046483 heterocycle metabolic process 12.73% (7/55) 2.94 3.3e-05 0.000288
GO:0140098 catalytic activity, acting on RNA 9.09% (5/55) 3.8 3e-05 0.000303
GO:0036094 small molecule binding 21.82% (12/55) 1.94 4.9e-05 0.000406
GO:0044429 mitochondrial part 5.45% (3/55) 5.39 5.2e-05 0.000409
GO:0032553 ribonucleotide binding 20.0% (11/55) 1.99 8e-05 0.000558
GO:0097367 carbohydrate derivative binding 20.0% (11/55) 1.98 8.3e-05 0.00056
GO:0016070 RNA metabolic process 9.09% (5/55) 3.48 8.7e-05 0.000569
GO:0032555 purine ribonucleotide binding 20.0% (11/55) 2.0 7.6e-05 0.000571
GO:0017076 purine nucleotide binding 20.0% (11/55) 1.99 7.9e-05 0.000575
GO:0098805 whole membrane 3.64% (2/55) 7.05 0.000102 0.0006
GO:0031968 organelle outer membrane 3.64% (2/55) 7.05 0.000102 0.0006
GO:0005741 mitochondrial outer membrane 3.64% (2/55) 7.05 0.000102 0.0006
GO:0043168 anion binding 20.0% (11/55) 1.83 0.000211 0.001207
GO:0098588 bounding membrane of organelle 3.64% (2/55) 6.33 0.000281 0.00156
GO:0006725 cellular aromatic compound metabolic process 10.91% (6/55) 2.7 0.000314 0.001694
GO:0034641 cellular nitrogen compound metabolic process 12.73% (7/55) 2.39 0.000353 0.001806
GO:0019867 outer membrane 3.64% (2/55) 6.18 0.000348 0.001827
GO:0090304 nucleic acid metabolic process 9.09% (5/55) 3.02 0.000376 0.001872
GO:0031966 mitochondrial membrane 3.64% (2/55) 6.05 0.000422 0.002046
GO:0005524 ATP binding 14.55% (8/55) 2.08 0.000555 0.002621
GO:0031090 organelle membrane 3.64% (2/55) 5.65 0.000738 0.0034
GO:0008144 drug binding 14.55% (8/55) 1.99 0.000839 0.003776
GO:0009349 riboflavin synthase complex 1.82% (1/55) 9.5 0.001377 0.005656
GO:0004635 phosphoribosyl-AMP cyclohydrolase activity 1.82% (1/55) 9.5 0.001377 0.005656
GO:0044283 small molecule biosynthetic process 5.45% (3/55) 3.8 0.00132 0.005801
GO:0006139 nucleobase-containing compound metabolic process 9.09% (5/55) 2.61 0.001376 0.005913
GO:0001882 nucleoside binding 5.45% (3/55) 3.61 0.001924 0.006993
GO:0032549 ribonucleoside binding 5.45% (3/55) 3.62 0.001893 0.007016
GO:0032550 purine ribonucleoside binding 5.45% (3/55) 3.62 0.001893 0.007016
GO:0005525 GTP binding 5.45% (3/55) 3.62 0.001893 0.007016
GO:0032561 guanyl ribonucleotide binding 5.45% (3/55) 3.62 0.001893 0.007016
GO:0001883 purine nucleoside binding 5.45% (3/55) 3.62 0.001893 0.007016
GO:0044237 cellular metabolic process 20.0% (11/55) 1.43 0.002099 0.007346
GO:0019001 guanyl nucleotide binding 5.45% (3/55) 3.57 0.002081 0.007423
GO:0045271 respiratory chain complex I 1.82% (1/55) 8.5 0.002751 0.008666
GO:0006419 alanyl-tRNA aminoacylation 1.82% (1/55) 8.5 0.002751 0.008666
GO:0030964 NADH dehydrogenase complex 1.82% (1/55) 8.5 0.002751 0.008666
GO:0005747 mitochondrial respiratory chain complex I 1.82% (1/55) 8.5 0.002751 0.008666
GO:0004813 alanine-tRNA ligase activity 1.82% (1/55) 8.5 0.002751 0.008666
GO:0019238 cyclohydrolase activity 1.82% (1/55) 8.5 0.002751 0.008666
GO:0008152 metabolic process 27.27% (15/55) 1.1 0.002828 0.008762
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.64% (2/55) 4.6 0.003129 0.009538
GO:0030554 adenyl nucleotide binding 14.55% (8/55) 1.67 0.003397 0.010033
GO:0032559 adenyl ribonucleotide binding 14.55% (8/55) 1.67 0.003352 0.010057
GO:0097159 organic cyclic compound binding 23.64% (13/55) 1.14 0.004644 0.013101
GO:1901363 heterocyclic compound binding 23.64% (13/55) 1.14 0.004644 0.013101
GO:0005488 binding 34.55% (19/55) 0.86 0.004608 0.013398
GO:0016746 transferase activity, transferring acyl groups 5.45% (3/55) 3.12 0.005052 0.014041
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 3.64% (2/55) 4.18 0.005488 0.015033
GO:0043167 ion binding 20.0% (11/55) 1.2 0.006934 0.018459
GO:0022904 respiratory electron transport chain 1.82% (1/55) 7.18 0.006864 0.018533
GO:1901362 organic cyclic compound biosynthetic process 5.45% (3/55) 2.91 0.007516 0.019729
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.82% (1/55) 6.92 0.008231 0.02047
GO:0006547 histidine metabolic process 1.82% (1/55) 6.92 0.008231 0.02047
GO:0000105 histidine biosynthetic process 1.82% (1/55) 6.92 0.008231 0.02047
GO:0052803 imidazole-containing compound metabolic process 1.82% (1/55) 6.92 0.008231 0.02047
GO:0044422 organelle part 5.45% (3/55) 2.77 0.00982 0.021835
GO:0044446 intracellular organelle part 5.45% (3/55) 2.77 0.00982 0.021835
GO:0098803 respiratory chain complex 1.82% (1/55) 6.7 0.009597 0.021853
GO:0042727 flavin-containing compound biosynthetic process 1.82% (1/55) 6.7 0.009597 0.021853
GO:0042726 flavin-containing compound metabolic process 1.82% (1/55) 6.7 0.009597 0.021853
GO:0009231 riboflavin biosynthetic process 1.82% (1/55) 6.7 0.009597 0.021853
GO:0006771 riboflavin metabolic process 1.82% (1/55) 6.7 0.009597 0.021853
GO:0009987 cellular process 20.0% (11/55) 1.15 0.00908 0.022288
GO:1902494 catalytic complex 3.64% (2/55) 3.79 0.009277 0.02248
GO:0016229 steroid dehydrogenase activity 1.82% (1/55) 6.5 0.01096 0.02354
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity 1.82% (1/55) 6.5 0.01096 0.02354
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.82% (1/55) 6.5 0.01096 0.02354
GO:0008610 lipid biosynthetic process 3.64% (2/55) 3.62 0.011596 0.024626
GO:0006694 steroid biosynthetic process 1.82% (1/55) 6.18 0.013682 0.028732
GO:0016053 organic acid biosynthetic process 3.64% (2/55) 3.45 0.014554 0.029899
GO:0046394 carboxylic acid biosynthetic process 3.64% (2/55) 3.45 0.014554 0.029899
GO:0008202 steroid metabolic process 1.82% (1/55) 6.05 0.01504 0.030565
GO:0016790 thiolester hydrolase activity 1.82% (1/55) 5.92 0.016396 0.031947
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.82% (1/55) 5.92 0.016396 0.031947
GO:0003954 NADH dehydrogenase activity 1.82% (1/55) 5.92 0.016396 0.031947
GO:0050136 NADH dehydrogenase (quinone) activity 1.82% (1/55) 5.92 0.016396 0.031947
GO:0006766 vitamin metabolic process 1.82% (1/55) 5.8 0.017751 0.032891
GO:0006767 water-soluble vitamin metabolic process 1.82% (1/55) 5.8 0.017751 0.032891
GO:0009110 vitamin biosynthetic process 1.82% (1/55) 5.8 0.017751 0.032891
GO:0042364 water-soluble vitamin biosynthetic process 1.82% (1/55) 5.8 0.017751 0.032891
GO:1901564 organonitrogen compound metabolic process 14.55% (8/55) 1.26 0.017719 0.034172
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.82% (1/55) 5.5 0.021803 0.040007
GO:0098800 inner mitochondrial membrane protein complex 1.82% (1/55) 5.42 0.02315 0.04167
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.82% (1/55) 5.42 0.02315 0.04167
GO:0008150 biological_process 30.91% (17/55) 0.69 0.024559 0.04338
GO:0044455 mitochondrial membrane part 1.82% (1/55) 5.33 0.024495 0.043675
GO:0098798 mitochondrial protein complex 1.82% (1/55) 5.26 0.025839 0.045218
GO:0071704 organic substance metabolic process 18.18% (10/55) 0.99 0.026357 0.045702
GO:0016020 membrane 7.27% (4/55) 1.82 0.026631 0.045757
GO:0055114 oxidation-reduction process 9.09% (5/55) 1.55 0.027825 0.047379
GO:0006413 translational initiation 1.82% (1/55) 5.11 0.02852 0.048128
GO:1901576 organic substance biosynthetic process 7.27% (4/55) 1.78 0.029175 0.048797
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_26 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_42 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_53 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_153 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_167 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_228 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_248 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_275 0.023 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_10 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_128 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_4 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_40 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_159 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_278 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_185 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_274 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_302 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_338 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_395 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_441 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_447 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_462 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_482 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_38 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_107 0.028 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_119 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_132 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_13 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_55 0.033 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_137 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_148 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_159 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_305 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_123 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_125 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_128 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_133 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_186 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_201 0.037 Gene family Compare
Vitis vinifera HCCA cluster Cluster_220 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_234 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_240 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_46 0.036 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.055 Gene family Compare
Zea mays HCCA cluster Cluster_156 0.037 Gene family Compare
Zea mays HCCA cluster Cluster_161 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_177 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_214 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.033 Gene family Compare
Zea mays HCCA cluster Cluster_304 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.022 Gene family Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms