Coexpression cluster: Cluster_4 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009226 nucleotide-sugar biosynthetic process 1.11% (1/90) 8.1 0.003643 0.040292
GO:0045905 positive regulation of translational termination 1.11% (1/90) 8.1 0.003643 0.040292
GO:0006448 regulation of translational elongation 1.11% (1/90) 8.1 0.003643 0.040292
GO:0006449 regulation of translational termination 1.11% (1/90) 8.1 0.003643 0.040292
GO:0045901 positive regulation of translational elongation 1.11% (1/90) 8.1 0.003643 0.040292
GO:0045727 positive regulation of translation 1.11% (1/90) 8.1 0.003643 0.040292
GO:0019673 GDP-mannose metabolic process 1.11% (1/90) 8.1 0.003643 0.040292
GO:0006452 translational frameshifting 1.11% (1/90) 8.1 0.003643 0.040292
GO:0043243 positive regulation of protein-containing complex disassembly 1.11% (1/90) 8.1 0.003643 0.040292
GO:0034250 positive regulation of cellular amide metabolic process 1.11% (1/90) 8.1 0.003643 0.040292
GO:0010628 positive regulation of gene expression 1.11% (1/90) 8.1 0.003643 0.040292
GO:0009298 GDP-mannose biosynthetic process 1.11% (1/90) 8.1 0.003643 0.040292
GO:0009225 nucleotide-sugar metabolic process 1.11% (1/90) 8.1 0.003643 0.040292
GO:0004615 phosphomannomutase activity 1.11% (1/90) 8.1 0.003643 0.040292
GO:0032270 positive regulation of cellular protein metabolic process 1.11% (1/90) 8.1 0.003643 0.040292
GO:0051247 positive regulation of protein metabolic process 1.11% (1/90) 8.1 0.003643 0.040292
GO:0031328 positive regulation of cellular biosynthetic process 1.11% (1/90) 7.1 0.007274 0.044112
GO:0009893 positive regulation of metabolic process 1.11% (1/90) 7.1 0.007274 0.044112
GO:0010557 positive regulation of macromolecule biosynthetic process 1.11% (1/90) 7.1 0.007274 0.044112
GO:0010604 positive regulation of macromolecule metabolic process 1.11% (1/90) 7.1 0.007274 0.044112
GO:0043022 ribosome binding 1.11% (1/90) 7.1 0.007274 0.044112
GO:0031325 positive regulation of cellular metabolic process 1.11% (1/90) 7.1 0.007274 0.044112
GO:0015934 large ribosomal subunit 1.11% (1/90) 7.1 0.007274 0.044112
GO:0009891 positive regulation of biosynthetic process 1.11% (1/90) 7.1 0.007274 0.044112
GO:0006366 transcription by RNA polymerase II 1.11% (1/90) 7.1 0.007274 0.044112
GO:0051173 positive regulation of nitrogen compound metabolic process 1.11% (1/90) 7.1 0.007274 0.044112
GO:0030896 checkpoint clamp complex 1.11% (1/90) 7.1 0.007274 0.044112
GO:0044391 ribosomal subunit 1.11% (1/90) 7.1 0.007274 0.044112
GO:0043227 membrane-bounded organelle 3.33% (3/90) 3.16 0.004648 0.045996
GO:0043231 intracellular membrane-bounded organelle 3.33% (3/90) 3.16 0.004648 0.045996
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Chlamydomonas reinhardtii HCCA Cluster_7 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_213 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_251 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_79 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_1 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_61 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_251 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.031 Archaeplastida Compare
Sequences (90) (download table)

InterPro Domains

GO Terms

Family Terms