Coexpression cluster: Cluster_182 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006351 transcription, DNA-templated 7.69% (4/52) 5.61 1e-06 0.000119
GO:0097659 nucleic acid-templated transcription 7.69% (4/52) 5.61 1e-06 0.000119
GO:0005488 binding 36.54% (19/52) 1.5 1.4e-05 0.000591
GO:0032774 RNA biosynthetic process 7.69% (4/52) 4.83 1.2e-05 0.000708
GO:0034062 5'-3' RNA polymerase activity 5.77% (3/52) 5.57 3.4e-05 0.000751
GO:0097747 RNA polymerase activity 5.77% (3/52) 5.57 3.4e-05 0.000751
GO:0003674 molecular_function 46.15% (24/52) 1.14 4.1e-05 0.0008
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.77% (3/52) 5.72 2.5e-05 0.000869
GO:0034645 cellular macromolecule biosynthetic process 9.62% (5/52) 3.8 3e-05 0.000873
GO:0009059 macromolecule biosynthetic process 9.62% (5/52) 3.58 6.2e-05 0.001079
GO:1901363 heterocyclic compound binding 23.08% (12/52) 1.83 9.5e-05 0.001391
GO:0097159 organic cyclic compound binding 23.08% (12/52) 1.83 9.5e-05 0.001391
GO:0009058 biosynthetic process 13.46% (7/52) 2.65 0.000118 0.001589
GO:0016070 RNA metabolic process 9.62% (5/52) 3.34 0.000132 0.001652
GO:0140098 catalytic activity, acting on RNA 7.69% (4/52) 3.83 0.000183 0.002137
GO:0110165 cellular anatomical entity 15.38% (8/52) 2.14 0.00042 0.004597
GO:0043167 ion binding 19.23% (10/52) 1.81 0.000449 0.004623
GO:0016779 nucleotidyltransferase activity 5.77% (3/52) 4.21 0.000577 0.005311
GO:0005575 cellular_component 17.31% (9/52) 1.91 0.000564 0.005486
GO:0044271 cellular nitrogen compound biosynthetic process 9.62% (5/52) 2.82 0.000696 0.006087
GO:0043168 anion binding 15.38% (8/52) 1.98 0.000856 0.007134
GO:0034654 nucleobase-containing compound biosynthetic process 7.69% (4/52) 3.16 0.001034 0.008227
GO:0036094 small molecule binding 15.38% (8/52) 1.89 0.001247 0.009487
GO:0070279 vitamin B6 binding 3.85% (2/52) 4.99 0.001821 0.011801
GO:0030170 pyridoxal phosphate binding 3.85% (2/52) 4.99 0.001821 0.011801
GO:1901362 organic cyclic compound biosynthetic process 7.69% (4/52) 2.88 0.002124 0.01199
GO:0090304 nucleic acid metabolic process 9.62% (5/52) 2.49 0.001949 0.012183
GO:0006425 glutaminyl-tRNA aminoacylation 1.92% (1/52) 8.89 0.002105 0.01228
GO:0004819 glutamine-tRNA ligase activity 1.92% (1/52) 8.89 0.002105 0.01228
GO:0018130 heterocycle biosynthetic process 7.69% (4/52) 2.94 0.001813 0.01269
GO:0019438 aromatic compound biosynthetic process 7.69% (4/52) 2.95 0.001786 0.013024
GO:0008150 biological_process 26.92% (14/52) 1.17 0.002521 0.013786
GO:0043170 macromolecule metabolic process 15.38% (8/52) 1.7 0.002956 0.015678
GO:0031224 intrinsic component of membrane 7.69% (4/52) 2.7 0.003316 0.015684
GO:0016021 integral component of membrane 7.69% (4/52) 2.7 0.003316 0.015684
GO:0019842 vitamin binding 3.85% (2/52) 4.61 0.003064 0.015771
GO:0044249 cellular biosynthetic process 9.62% (5/52) 2.32 0.003211 0.016054
GO:1901576 organic substance biosynthetic process 9.62% (5/52) 2.28 0.003633 0.01673
GO:0070652 HAUS complex 1.92% (1/52) 7.89 0.004206 0.017524
GO:0007051 spindle organization 1.92% (1/52) 7.89 0.004206 0.017524
GO:0051225 spindle assembly 1.92% (1/52) 7.89 0.004206 0.017524
GO:0008152 metabolic process 19.23% (10/52) 1.39 0.004123 0.0185
GO:0034641 cellular nitrogen compound metabolic process 11.54% (6/52) 1.92 0.004798 0.019528
GO:0044260 cellular macromolecule metabolic process 11.54% (6/52) 1.82 0.006766 0.026912
GO:0000226 microtubule cytoskeleton organization 1.92% (1/52) 6.89 0.008394 0.031935
GO:0009987 cellular process 21.15% (11/52) 1.17 0.008213 0.03194
GO:0070925 organelle assembly 1.92% (1/52) 6.57 0.010482 0.035276
GO:0035639 purine ribonucleoside triphosphate binding 11.54% (6/52) 1.7 0.009881 0.035288
GO:0032555 purine ribonucleotide binding 11.54% (6/52) 1.69 0.010197 0.035691
GO:0006807 nitrogen compound metabolic process 15.38% (8/52) 1.4 0.009814 0.035779
GO:0017076 purine nucleotide binding 11.54% (6/52) 1.69 0.010467 0.035917
GO:0006139 nucleobase-containing compound metabolic process 9.62% (5/52) 1.94 0.009708 0.036147
GO:0007010 cytoskeleton organization 1.92% (1/52) 6.31 0.012566 0.03665
GO:0008716 D-alanine-D-alanine ligase activity 1.92% (1/52) 6.31 0.012566 0.03665
GO:0004177 aminopeptidase activity 1.92% (1/52) 6.31 0.012566 0.03665
GO:0097367 carbohydrate derivative binding 11.54% (6/52) 1.66 0.011422 0.037016
GO:0032553 ribonucleotide binding 11.54% (6/52) 1.66 0.011249 0.037144
GO:1901360 organic cyclic compound metabolic process 9.62% (5/52) 1.82 0.013393 0.038422
GO:0006725 cellular aromatic compound metabolic process 9.62% (5/52) 1.84 0.012545 0.038515
GO:0003676 nucleic acid binding 9.62% (5/52) 1.85 0.01247 0.038968
GO:0046483 heterocycle metabolic process 9.62% (5/52) 1.85 0.012395 0.039438
GO:0022402 cell cycle process 1.92% (1/52) 6.08 0.014645 0.041336
GO:0044238 primary metabolic process 15.38% (8/52) 1.29 0.015397 0.04277
GO:0000166 nucleotide binding 11.54% (6/52) 1.54 0.01631 0.04391
GO:1901265 nucleoside phosphate binding 11.54% (6/52) 1.54 0.01631 0.04391
GO:0016874 ligase activity 3.85% (2/52) 3.26 0.018512 0.049085
GO:0003677 DNA binding 5.77% (3/52) 2.41 0.019066 0.049799
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_177 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_189 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_254 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_258 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_120 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_198 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_243 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_179 0.034 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_160 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_210 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_290 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_37 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_60 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_79 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_81 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_187 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_38 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_118 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_172 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_227 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_294 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_376 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_14 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_113 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_221 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_300 0.039 Archaeplastida Compare
Picea abies HCCA Cluster_198 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_455 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_487 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_145 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_123 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_205 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_212 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_229 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_28 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_332 0.026 Archaeplastida Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms