Coexpression cluster: Cluster_84 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.0% (4/80) 4.84 1.1e-05 0.000302
GO:0004812 aminoacyl-tRNA ligase activity 5.0% (4/80) 4.84 1.1e-05 0.000302
GO:0008150 biological_process 30.0% (24/80) 1.33 1.3e-05 0.000303
GO:0034660 ncRNA metabolic process 6.25% (5/80) 4.02 1.4e-05 0.000306
GO:0043038 amino acid activation 5.0% (4/80) 4.88 1e-05 0.000366
GO:0043039 tRNA aminoacylation 5.0% (4/80) 4.88 1e-05 0.000366
GO:0034033 purine nucleoside bisphosphate biosynthetic process 2.5% (2/80) 7.69 3.1e-05 0.000436
GO:0015937 coenzyme A biosynthetic process 2.5% (2/80) 7.69 3.1e-05 0.000436
GO:0033866 nucleoside bisphosphate biosynthetic process 2.5% (2/80) 7.69 3.1e-05 0.000436
GO:0034030 ribonucleoside bisphosphate biosynthetic process 2.5% (2/80) 7.69 3.1e-05 0.000436
GO:0006629 lipid metabolic process 6.25% (5/80) 3.82 2.8e-05 0.000541
GO:0004594 pantothenate kinase activity 2.5% (2/80) 8.27 1e-05 0.000546
GO:0019752 carboxylic acid metabolic process 6.25% (5/80) 3.66 4.8e-05 0.000638
GO:0140101 catalytic activity, acting on a tRNA 5.0% (4/80) 4.27 5.6e-05 0.000655
GO:1901360 organic cyclic compound metabolic process 12.5% (10/80) 2.2 6.2e-05 0.000658
GO:0043436 oxoacid metabolic process 6.25% (5/80) 3.63 5.4e-05 0.000674
GO:0006082 organic acid metabolic process 6.25% (5/80) 3.56 6.8e-05 0.000682
GO:0015936 coenzyme A metabolic process 2.5% (2/80) 7.27 6.2e-05 0.000687
GO:0044281 small molecule metabolic process 10.0% (8/80) 2.93 1e-05 0.000722
GO:0071704 organic substance metabolic process 20.0% (16/80) 1.56 7.7e-05 0.000735
GO:0006418 tRNA aminoacylation for protein translation 5.0% (4/80) 4.99 8e-06 0.000812
GO:0006399 tRNA metabolic process 6.25% (5/80) 4.38 4e-06 0.000896
GO:0033875 ribonucleoside bisphosphate metabolic process 2.5% (2/80) 6.46 0.000215 0.001622
GO:0033865 nucleoside bisphosphate metabolic process 2.5% (2/80) 6.46 0.000215 0.001622
GO:0034032 purine nucleoside bisphosphate metabolic process 2.5% (2/80) 6.46 0.000215 0.001622
GO:0006139 nucleobase-containing compound metabolic process 11.25% (9/80) 2.16 0.000179 0.001645
GO:0006520 cellular amino acid metabolic process 5.0% (4/80) 3.81 0.000193 0.001701
GO:0008152 metabolic process 20.0% (16/80) 1.44 0.000203 0.001712
GO:0009150 purine ribonucleotide metabolic process 3.75% (3/80) 4.5 0.000319 0.00198
GO:0019693 ribose phosphate metabolic process 3.75% (3/80) 4.5 0.000319 0.00198
GO:0009259 ribonucleotide metabolic process 3.75% (3/80) 4.5 0.000319 0.00198
GO:0006725 cellular aromatic compound metabolic process 11.25% (9/80) 2.07 0.000288 0.002022
GO:0046483 heterocycle metabolic process 11.25% (9/80) 2.07 0.000281 0.002046
GO:0016874 ligase activity 5.0% (4/80) 3.64 0.000304 0.002069
GO:0006163 purine nucleotide metabolic process 3.75% (3/80) 4.4 0.000394 0.002373
GO:0044238 primary metabolic process 17.5% (14/80) 1.47 0.000436 0.002554
GO:0072521 purine-containing compound metabolic process 3.75% (3/80) 4.3 0.000479 0.002729
GO:0003674 molecular_function 37.5% (30/80) 0.84 0.000497 0.002761
GO:0034641 cellular nitrogen compound metabolic process 11.25% (9/80) 1.89 0.000715 0.003866
GO:0046390 ribose phosphate biosynthetic process 2.5% (2/80) 5.57 0.000789 0.003966
GO:0009260 ribonucleotide biosynthetic process 2.5% (2/80) 5.57 0.000789 0.003966
GO:0009152 purine ribonucleotide biosynthetic process 2.5% (2/80) 5.57 0.000789 0.003966
GO:0140098 catalytic activity, acting on RNA 5.0% (4/80) 3.2 0.000952 0.004671
GO:0016070 RNA metabolic process 6.25% (5/80) 2.72 0.000986 0.00473
GO:0016740 transferase activity 11.25% (9/80) 1.79 0.001154 0.00541
GO:0006164 purine nucleotide biosynthetic process 2.5% (2/80) 5.27 0.001207 0.005536
GO:0072522 purine-containing compound biosynthetic process 2.5% (2/80) 5.02 0.001709 0.007672
GO:0009117 nucleotide metabolic process 5.0% (4/80) 2.9 0.002046 0.008995
GO:0006753 nucleoside phosphate metabolic process 5.0% (4/80) 2.88 0.002185 0.009407
GO:0006811 ion transport 6.25% (5/80) 2.44 0.002309 0.009745
GO:0055086 nucleobase-containing small molecule metabolic process 5.0% (4/80) 2.72 0.003276 0.0108
GO:0004781 sulfate adenylyltransferase (ATP) activity 1.25% (1/80) 8.27 0.003239 0.010847
GO:0046500 S-adenosylmethionine metabolic process 1.25% (1/80) 8.27 0.003239 0.010847
GO:0004396 hexokinase activity 1.25% (1/80) 8.27 0.003239 0.010847
GO:0004478 methionine adenosyltransferase activity 1.25% (1/80) 8.27 0.003239 0.010847
GO:0004340 glucokinase activity 1.25% (1/80) 8.27 0.003239 0.010847
GO:0004779 sulfate adenylyltransferase activity 1.25% (1/80) 8.27 0.003239 0.010847
GO:0005536 glucose binding 1.25% (1/80) 8.27 0.003239 0.010847
GO:0006556 S-adenosylmethionine biosynthetic process 1.25% (1/80) 8.27 0.003239 0.010847
GO:0005216 ion channel activity 3.75% (3/80) 3.32 0.003442 0.011174
GO:0090079 translation regulator activity, nucleic acid binding 2.5% (2/80) 4.63 0.002961 0.011358
GO:0045182 translation regulator activity 2.5% (2/80) 4.63 0.002961 0.011358
GO:0008135 translation factor activity, RNA binding 2.5% (2/80) 4.63 0.002961 0.011358
GO:0015318 inorganic molecular entity transmembrane transporter activity 5.0% (4/80) 2.78 0.002803 0.011373
GO:1901135 carbohydrate derivative metabolic process 3.75% (3/80) 3.43 0.002759 0.011415
GO:0015267 channel activity 3.75% (3/80) 3.29 0.003655 0.01151
GO:0022803 passive transmembrane transporter activity 3.75% (3/80) 3.29 0.003655 0.01151
GO:0015075 ion transmembrane transporter activity 5.0% (4/80) 2.63 0.004011 0.012446
GO:0019637 organophosphate metabolic process 5.0% (4/80) 2.53 0.005184 0.015405
GO:0003824 catalytic activity 20.0% (16/80) 1.01 0.005047 0.015433
GO:1901576 organic substance biosynthetic process 7.5% (6/80) 1.92 0.005154 0.015535
GO:1901137 carbohydrate derivative biosynthetic process 2.5% (2/80) 4.18 0.005433 0.015922
GO:0005488 binding 23.75% (19/80) 0.88 0.005762 0.016654
GO:0070566 adenylyltransferase activity 1.25% (1/80) 7.27 0.006467 0.017721
GO:0006433 prolyl-tRNA aminoacylation 1.25% (1/80) 7.27 0.006467 0.017721
GO:0004827 proline-tRNA ligase activity 1.25% (1/80) 7.27 0.006467 0.017721
GO:0051156 glucose 6-phosphate metabolic process 1.25% (1/80) 7.27 0.006467 0.017721
GO:0044237 cellular metabolic process 13.75% (11/80) 1.23 0.00684 0.018504
GO:0009987 cellular process 18.75% (15/80) 0.99 0.007313 0.019533
GO:0009058 biosynthetic process 7.5% (6/80) 1.8 0.00754 0.019888
GO:1901293 nucleoside phosphate biosynthetic process 3.75% (3/80) 2.79 0.009462 0.024347
GO:0009165 nucleotide biosynthetic process 3.75% (3/80) 2.79 0.009462 0.024347
GO:0048029 monosaccharide binding 1.25% (1/80) 6.69 0.009685 0.02462
GO:1901362 organic cyclic compound biosynthetic process 5.0% (4/80) 2.26 0.009892 0.024849
GO:0005737 cytoplasm 2.5% (2/80) 3.69 0.01061 0.026031
GO:0005524 ATP binding 8.75% (7/80) 1.53 0.010605 0.026326
GO:0032559 adenyl ribonucleotide binding 8.75% (7/80) 1.52 0.011048 0.026794
GO:0030554 adenyl nucleotide binding 8.75% (7/80) 1.52 0.011198 0.02685
GO:0022857 transmembrane transporter activity 5.0% (4/80) 2.19 0.011683 0.027698
GO:0090304 nucleic acid metabolic process 6.25% (5/80) 1.86 0.012225 0.02866
GO:0005852 eukaryotic translation initiation factor 3 complex 1.25% (1/80) 6.27 0.012892 0.029568
GO:0006694 steroid biosynthetic process 1.25% (1/80) 6.27 0.012892 0.029568
GO:0005215 transporter activity 5.0% (4/80) 2.13 0.013352 0.030292
GO:0000166 nucleotide binding 10.0% (8/80) 1.34 0.013704 0.030436
GO:1901265 nucleoside phosphate binding 10.0% (8/80) 1.34 0.013704 0.030436
GO:0006810 transport 6.25% (5/80) 1.78 0.015455 0.033968
GO:0051234 establishment of localization 6.25% (5/80) 1.77 0.015725 0.034205
GO:0051179 localization 6.25% (5/80) 1.76 0.016413 0.034632
GO:0008202 steroid metabolic process 1.25% (1/80) 5.95 0.01609 0.034642
GO:0016020 membrane 5.0% (4/80) 2.04 0.016396 0.034946
GO:0090407 organophosphate biosynthetic process 3.75% (3/80) 2.45 0.017598 0.036405
GO:0036094 small molecule binding 10.0% (8/80) 1.27 0.017517 0.036595
GO:0006414 translational elongation 1.25% (1/80) 5.69 0.019277 0.038737
GO:0003746 translation elongation factor activity 1.25% (1/80) 5.69 0.019277 0.038737
GO:0044249 cellular biosynthetic process 6.25% (5/80) 1.7 0.019213 0.039359
GO:0005230 extracellular ligand-gated ion channel activity 1.25% (1/80) 5.46 0.022454 0.043466
GO:0022834 ligand-gated channel activity 1.25% (1/80) 5.46 0.022454 0.043466
GO:0015276 ligand-gated ion channel activity 1.25% (1/80) 5.46 0.022454 0.043466
GO:0110165 cellular anatomical entity 8.75% (7/80) 1.32 0.021983 0.043759
GO:0035639 purine ribonucleoside triphosphate binding 8.75% (7/80) 1.3 0.023232 0.044563
GO:0032555 purine ribonucleotide binding 8.75% (7/80) 1.29 0.024004 0.045629
GO:0017076 purine nucleotide binding 8.75% (7/80) 1.29 0.024661 0.04646
GO:0032553 ribonucleotide binding 8.75% (7/80) 1.26 0.026567 0.049607
GO:0097367 carbohydrate derivative binding 8.75% (7/80) 1.26 0.026988 0.049952
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_133 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_195 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_9 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_7 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_13 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_16 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_18 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_21 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_24 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_28 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_30 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_34 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_35 0.044 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_48 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_55 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_64 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_75 0.045 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_78 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_81 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_83 0.041 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_85 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_88 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_90 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_92 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_93 0.032 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_98 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_99 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_107 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_110 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_111 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_120 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_124 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_127 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.032 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_132 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_133 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_134 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_135 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_137 0.052 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_140 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_146 0.044 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_150 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_159 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_163 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_170 0.046 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_177 0.04 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_188 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_207 0.037 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_208 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_37 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_142 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_379 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_219 0.019 Archaeplastida Compare
Sequences (80) (download table)

InterPro Domains

GO Terms

Family Terms