Coexpression cluster: Cluster_2 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044422 organelle part 10.13% (8/79) 3.66 0.0 2.9e-05
GO:0044446 intracellular organelle part 10.13% (8/79) 3.66 0.0 2.9e-05
GO:0044451 nucleoplasm part 5.06% (4/79) 5.49 2e-06 0.000116
GO:0044428 nuclear part 6.33% (5/79) 4.66 2e-06 0.000135
GO:0090304 nucleic acid metabolic process 8.86% (7/79) 2.99 3e-05 0.001183
GO:0004386 helicase activity 3.8% (3/79) 5.66 2.9e-05 0.00136
GO:0032774 RNA biosynthetic process 5.06% (4/79) 4.17 7.5e-05 0.001458
GO:0016817 hydrolase activity, acting on acid anhydrides 7.59% (6/79) 3.12 7e-05 0.001495
GO:0017111 nucleoside-triphosphatase activity 7.59% (6/79) 3.23 4.6e-05 0.001534
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.59% (6/79) 3.12 6.8e-05 0.001593
GO:0005669 transcription factor TFIID complex 2.53% (2/79) 7.4 5.8e-05 0.001685
GO:0016462 pyrophosphatase activity 7.59% (6/79) 3.13 6.6e-05 0.001715
GO:0044424 intracellular part 12.66% (10/79) 2.07 0.000129 0.002327
GO:0006139 nucleobase-containing compound metabolic process 8.86% (7/79) 2.57 0.000184 0.00307
GO:0044464 cell part 12.66% (10/79) 1.99 0.000204 0.003183
GO:0044798 nuclear transcription factor complex 2.53% (2/79) 6.28 0.000297 0.003859
GO:0090575 RNA polymerase II transcription factor complex 2.53% (2/79) 6.28 0.000297 0.003859
GO:0003676 nucleic acid binding 13.92% (11/79) 1.81 0.000282 0.004126
GO:0046483 heterocycle metabolic process 8.86% (7/79) 2.42 0.00034 0.004187
GO:0006725 cellular aromatic compound metabolic process 8.86% (7/79) 2.4 0.000369 0.004313
GO:1901360 organic cyclic compound metabolic process 8.86% (7/79) 2.36 0.000432 0.004811
GO:0016070 RNA metabolic process 6.33% (5/79) 2.96 0.000482 0.00513
GO:0005667 transcription factor complex 2.53% (2/79) 5.73 0.000646 0.00657
GO:0034654 nucleobase-containing compound biosynthetic process 5.06% (4/79) 3.25 0.000848 0.008269
GO:0032991 protein-containing complex 8.86% (7/79) 2.16 0.001001 0.009368
GO:0006352 DNA-templated transcription, initiation 2.53% (2/79) 5.12 0.001514 0.013624
GO:0018130 heterocycle biosynthetic process 5.06% (4/79) 2.96 0.001796 0.015564
GO:0019438 aromatic compound biosynthetic process 5.06% (4/79) 2.94 0.001898 0.015864
GO:0004609 phosphatidylserine decarboxylase activity 1.27% (1/79) 8.98 0.001977 0.015954
GO:1901362 organic cyclic compound biosynthetic process 5.06% (4/79) 2.8 0.002665 0.020785
GO:0034641 cellular nitrogen compound metabolic process 8.86% (7/79) 1.87 0.003064 0.023128
GO:0003774 motor activity 2.53% (2/79) 4.34 0.004446 0.032515
GO:0055029 nuclear DNA-directed RNA polymerase complex 1.27% (1/79) 7.4 0.00592 0.03958
GO:0000428 DNA-directed RNA polymerase complex 1.27% (1/79) 7.4 0.00592 0.03958
GO:0005666 RNA polymerase III complex 1.27% (1/79) 7.4 0.00592 0.03958
GO:0061505 DNA topoisomerase II activity 1.27% (1/79) 6.98 0.007886 0.040115
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.27% (1/79) 6.98 0.007886 0.040115
GO:0006383 transcription by RNA polymerase III 1.27% (1/79) 6.98 0.007886 0.040115
GO:0016593 Cdc73/Paf1 complex 1.27% (1/79) 6.98 0.007886 0.040115
GO:0006368 transcription elongation from RNA polymerase II promoter 1.27% (1/79) 6.98 0.007886 0.040115
GO:0004659 prenyltransferase activity 1.27% (1/79) 6.98 0.007886 0.040115
GO:0008318 protein prenyltransferase activity 1.27% (1/79) 6.98 0.007886 0.040115
GO:0006354 DNA-templated transcription, elongation 1.27% (1/79) 6.98 0.007886 0.040115
GO:0018342 protein prenylation 1.27% (1/79) 6.98 0.007886 0.040115
GO:0097354 prenylation 1.27% (1/79) 6.98 0.007886 0.040115
GO:0016787 hydrolase activity 11.39% (9/79) 1.39 0.00731 0.047516
GO:0016459 myosin complex 1.27% (1/79) 6.66 0.009848 0.048007
GO:0008023 transcription elongation factor complex 1.27% (1/79) 6.66 0.009848 0.048007
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_6 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_8 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.029 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_56 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_66 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_90 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_96 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_103 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_111 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_127 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_150 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_199 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_215 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_217 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_224 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_249 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_272 0.034 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_16 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_31 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_126 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_184 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_66 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_87 0.023 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.033 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_101 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_165 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_52 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_161 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_174 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_205 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_206 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_258 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_274 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_313 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_57 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_204 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_331 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_334 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_360 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_373 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_434 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_450 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_453 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_70 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_164 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_189 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_25 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.033 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_126 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_176 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_185 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_196 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.036 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_239 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.035 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.033 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_303 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_308 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_309 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_96 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_109 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_112 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_128 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_158 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_165 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_182 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_207 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_210 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_220 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_241 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_16 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_73 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_90 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_108 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_151 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_186 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_266 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_281 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.037 Gene family Compare
Zea mays HCCA cluster Cluster_306 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_322 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_328 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_349 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_356 0.016 Gene family Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms