Coexpression cluster: Cluster_25 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 8.53% (18/211) 2.73 0.0 0.0
GO:0000166 nucleotide binding 14.22% (30/211) 1.85 0.0 0.0
GO:1901265 nucleoside phosphate binding 14.22% (30/211) 1.85 0.0 0.0
GO:0017076 purine nucleotide binding 13.27% (28/211) 1.89 0.0 0.0
GO:0043167 ion binding 16.59% (35/211) 1.6 0.0 0.0
GO:0032555 purine ribonucleotide binding 13.27% (28/211) 1.9 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 13.27% (28/211) 1.91 0.0 0.0
GO:0043168 anion binding 13.74% (29/211) 1.82 0.0 0.0
GO:0097367 carbohydrate derivative binding 13.27% (28/211) 1.86 0.0 0.0
GO:0036094 small molecule binding 14.69% (31/211) 1.83 0.0 0.0
GO:0032553 ribonucleotide binding 13.27% (28/211) 1.86 0.0 0.0
GO:0003674 molecular_function 37.44% (79/211) 0.84 0.0 1e-06
GO:0005488 binding 26.54% (56/211) 1.04 0.0 3e-06
GO:1901363 heterocyclic compound binding 16.59% (35/211) 1.36 0.0 8e-06
GO:0097159 organic cyclic compound binding 16.59% (35/211) 1.36 0.0 8e-06
GO:0016272 prefoldin complex 1.42% (3/211) 6.87 1e-06 1.7e-05
GO:0070003 threonine-type peptidase activity 1.9% (4/211) 5.55 1e-06 2.4e-05
GO:0005839 proteasome core complex 1.9% (4/211) 5.55 1e-06 2.4e-05
GO:0004298 threonine-type endopeptidase activity 1.9% (4/211) 5.55 1e-06 2.4e-05
GO:0032550 purine ribonucleoside binding 4.27% (9/211) 3.04 2e-06 2.9e-05
GO:0032549 ribonucleoside binding 4.27% (9/211) 3.04 2e-06 2.9e-05
GO:0032561 guanyl ribonucleotide binding 4.27% (9/211) 3.04 2e-06 2.9e-05
GO:0005525 GTP binding 4.27% (9/211) 3.04 2e-06 2.9e-05
GO:0001883 purine nucleoside binding 4.27% (9/211) 3.04 2e-06 2.9e-05
GO:0001882 nucleoside binding 4.27% (9/211) 3.03 2e-06 3e-05
GO:0019001 guanyl nucleotide binding 4.27% (9/211) 3.01 2e-06 3.3e-05
GO:0051649 establishment of localization in cell 2.84% (6/211) 3.65 8e-06 0.000127
GO:0046907 intracellular transport 2.84% (6/211) 3.65 8e-06 0.000127
GO:0006457 protein folding 1.9% (4/211) 4.87 9e-06 0.00013
GO:0051603 proteolysis involved in cellular protein catabolic process 2.37% (5/211) 4.11 1e-05 0.000142
GO:0009987 cellular process 18.96% (40/211) 1.01 1.5e-05 0.000207
GO:0005575 cellular_component 11.85% (25/211) 1.36 1.6e-05 0.000212
GO:0008150 biological_process 22.27% (47/211) 0.9 1.7e-05 0.000217
GO:0051641 cellular localization 2.84% (6/211) 3.41 2.1e-05 0.000273
GO:0005524 ATP binding 9.0% (19/211) 1.57 2.4e-05 0.000303
GO:0032559 adenyl ribonucleotide binding 9.0% (19/211) 1.56 2.7e-05 0.000328
GO:0030554 adenyl nucleotide binding 9.0% (19/211) 1.56 2.8e-05 0.000331
GO:0043170 macromolecule metabolic process 11.37% (24/211) 1.26 7e-05 0.000799
GO:0051082 unfolded protein binding 1.42% (3/211) 4.87 0.000128 0.001418
GO:0140096 catalytic activity, acting on a protein 7.58% (16/211) 1.52 0.000167 0.001807
GO:0051236 establishment of RNA localization 0.95% (2/211) 6.29 0.000217 0.001996
GO:0051168 nuclear export 0.95% (2/211) 6.29 0.000217 0.001996
GO:0006406 mRNA export from nucleus 0.95% (2/211) 6.29 0.000217 0.001996
GO:0050658 RNA transport 0.95% (2/211) 6.29 0.000217 0.001996
GO:0050657 nucleic acid transport 0.95% (2/211) 6.29 0.000217 0.001996
GO:0006405 RNA export from nucleus 0.95% (2/211) 6.29 0.000217 0.001996
GO:0051028 mRNA transport 0.95% (2/211) 6.29 0.000217 0.001996
GO:0006807 nitrogen compound metabolic process 12.32% (26/211) 1.08 0.000246 0.002223
GO:0008152 metabolic process 14.22% (30/211) 0.95 0.000386 0.003412
GO:0006913 nucleocytoplasmic transport 0.95% (2/211) 5.87 0.000431 0.003587
GO:0051169 nuclear transport 0.95% (2/211) 5.87 0.000431 0.003587
GO:0043015 gamma-tubulin binding 0.95% (2/211) 5.87 0.000431 0.003587
GO:0071705 nitrogen compound transport 2.37% (5/211) 2.96 0.000461 0.003764
GO:0071702 organic substance transport 2.37% (5/211) 2.82 0.000734 0.005882
GO:0044238 primary metabolic process 12.32% (26/211) 0.97 0.000822 0.006475
GO:0003824 catalytic activity 17.06% (36/211) 0.78 0.000952 0.00723
GO:1901564 organonitrogen compound metabolic process 8.53% (18/211) 1.2 0.000973 0.007265
GO:0016070 RNA metabolic process 3.79% (8/211) 2.0 0.000946 0.007312
GO:0005643 nuclear pore 0.95% (2/211) 5.29 0.001065 0.007319
GO:0048518 positive regulation of biological process 0.95% (2/211) 5.29 0.001065 0.007319
GO:0048522 positive regulation of cellular process 0.95% (2/211) 5.29 0.001065 0.007319
GO:0071704 organic substance metabolic process 12.8% (27/211) 0.92 0.001062 0.007667
GO:0019538 protein metabolic process 7.11% (15/211) 1.33 0.001059 0.00777
GO:0140513 nuclear protein-containing complex 1.9% (4/211) 3.12 0.001172 0.007926
GO:0044237 cellular metabolic process 11.37% (24/211) 0.96 0.001464 0.009752
GO:0043412 macromolecule modification 5.21% (11/211) 1.55 0.001492 0.00979
GO:0016310 phosphorylation 4.27% (9/211) 1.72 0.001804 0.01166
GO:0030120 vesicle coat 0.95% (2/211) 4.87 0.001966 0.012516
GO:0003924 GTPase activity 1.9% (4/211) 2.85 0.002332 0.014632
GO:0032774 RNA biosynthetic process 1.9% (4/211) 2.81 0.002605 0.015886
GO:0006820 anion transport 2.37% (5/211) 2.41 0.002569 0.015893
GO:0006468 protein phosphorylation 3.79% (8/211) 1.76 0.002726 0.016396
GO:0006464 cellular protein modification process 4.74% (10/211) 1.51 0.002995 0.017524
GO:0036211 protein modification process 4.74% (10/211) 1.51 0.002995 0.017524
GO:0050662 obsolete coenzyme binding 0.95% (2/211) 4.55 0.003124 0.018034
GO:0005667 transcription regulator complex 0.95% (2/211) 4.41 0.003796 0.021629
GO:0030117 membrane coat 0.95% (2/211) 4.29 0.00453 0.02483
GO:0097659 nucleic acid-templated transcription 1.42% (3/211) 3.17 0.004477 0.024856
GO:0006351 transcription, DNA-templated 1.42% (3/211) 3.17 0.004477 0.024856
GO:0015931 nucleobase-containing compound transport 0.95% (2/211) 4.17 0.005324 0.028815
GO:0043933 protein-containing complex subunit organization 1.42% (3/211) 3.06 0.00552 0.029509
GO:0016301 kinase activity 4.27% (9/211) 1.44 0.006269 0.033103
GO:0046923 ER retention sequence binding 0.47% (1/211) 6.87 0.008542 0.034892
GO:0008154 actin polymerization or depolymerization 0.47% (1/211) 6.87 0.008542 0.034892
GO:0045893 positive regulation of transcription, DNA-templated 0.47% (1/211) 6.87 0.008542 0.034892
GO:0006621 protein retention in ER lumen 0.47% (1/211) 6.87 0.008542 0.034892
GO:0005801 cis-Golgi network 0.47% (1/211) 6.87 0.008542 0.034892
GO:0051651 maintenance of location in cell 0.47% (1/211) 6.87 0.008542 0.034892
GO:0032507 maintenance of protein location in cell 0.47% (1/211) 6.87 0.008542 0.034892
GO:0035437 maintenance of protein localization in endoplasmic reticulum 0.47% (1/211) 6.87 0.008542 0.034892
GO:0051258 protein polymerization 0.47% (1/211) 6.87 0.008542 0.034892
GO:0008541 proteasome regulatory particle, lid subcomplex 0.47% (1/211) 6.87 0.008542 0.034892
GO:0072595 maintenance of protein localization in organelle 0.47% (1/211) 6.87 0.008542 0.034892
GO:0045185 maintenance of protein location 0.47% (1/211) 6.87 0.008542 0.034892
GO:0005200 structural constituent of cytoskeleton 0.47% (1/211) 6.87 0.008542 0.034892
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 0.47% (1/211) 6.87 0.008542 0.034892
GO:0051254 positive regulation of RNA metabolic process 0.47% (1/211) 6.87 0.008542 0.034892
GO:0004357 glutamate-cysteine ligase activity 0.47% (1/211) 6.87 0.008542 0.034892
GO:1902680 positive regulation of RNA biosynthetic process 0.47% (1/211) 6.87 0.008542 0.034892
GO:0006897 endocytosis 0.47% (1/211) 6.87 0.008542 0.034892
GO:0030041 actin filament polymerization 0.47% (1/211) 6.87 0.008542 0.034892
GO:0004826 phenylalanine-tRNA ligase activity 0.47% (1/211) 6.87 0.008542 0.034892
GO:1903508 positive regulation of nucleic acid-templated transcription 0.47% (1/211) 6.87 0.008542 0.034892
GO:0006886 intracellular protein transport 1.42% (3/211) 2.96 0.006697 0.034936
GO:0044260 cellular macromolecule metabolic process 6.64% (14/211) 1.02 0.009788 0.03961
GO:0051287 NAD binding 0.95% (2/211) 3.7 0.010154 0.04071
GO:0004672 protein kinase activity 3.79% (8/211) 1.49 0.008101 0.041757
GO:0044267 cellular protein metabolic process 4.74% (10/211) 1.24 0.01059 0.04207
GO:0016192 vesicle-mediated transport 1.42% (3/211) 2.84 0.008481 0.043204
GO:0090304 nucleic acid metabolic process 4.27% (9/211) 1.31 0.01101 0.04334
GO:0016772 transferase activity, transferring phosphorus-containing groups 4.74% (10/211) 1.23 0.011156 0.043518
GO:0015833 peptide transport 1.42% (3/211) 2.65 0.012218 0.046406
GO:0042886 amide transport 1.42% (3/211) 2.65 0.012218 0.046406
GO:0015031 protein transport 1.42% (3/211) 2.65 0.012218 0.046406
GO:0006508 proteolysis 2.84% (6/211) 1.64 0.01305 0.049136
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_178 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_180 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_201 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_240 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_40 0.057 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_263 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_7 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.035 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_27 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_64 0.047 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_79 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_117 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_144 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_31 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_77 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_135 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_185 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_250 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_277 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_301 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_342 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_361 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_10 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_128 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_145 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_187 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_251 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_274 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_537 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_14 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_65 0.046 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_73 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_48 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_174 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_230 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_269 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_3 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_38 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_90 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_145 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_194 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_237 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_239 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_13 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_59 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_72 0.046 Archaeplastida Compare
Zea mays HCCA Cluster_145 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_297 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_339 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_355 0.021 Archaeplastida Compare
Sequences (211) (download table)

InterPro Domains

GO Terms

Family Terms