Coexpression cluster: Cluster_17 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 37.01% (47/127) 5.57 0.0 0.0
GO:0043043 peptide biosynthetic process 37.01% (47/127) 6.68 0.0 0.0
GO:0043226 organelle 36.22% (46/127) 5.52 0.0 0.0
GO:0043228 non-membrane-bounded organelle 36.22% (46/127) 6.47 0.0 0.0
GO:0043229 intracellular organelle 36.22% (46/127) 5.53 0.0 0.0
GO:0043603 cellular amide metabolic process 37.01% (47/127) 6.57 0.0 0.0
GO:0043604 amide biosynthetic process 37.01% (47/127) 6.65 0.0 0.0
GO:0044249 cellular biosynthetic process 37.8% (48/127) 4.29 0.0 0.0
GO:1901576 organic substance biosynthetic process 37.8% (48/127) 4.25 0.0 0.0
GO:0044267 cellular protein metabolic process 37.8% (48/127) 4.23 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 37.8% (48/127) 4.8 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 37.01% (47/127) 5.74 0.0 0.0
GO:0009059 macromolecule biosynthetic process 37.01% (47/127) 5.52 0.0 0.0
GO:0006412 translation 37.01% (47/127) 6.82 0.0 0.0
GO:0005198 structural molecule activity 37.01% (47/127) 6.67 0.0 0.0
GO:0005840 ribosome 36.22% (46/127) 6.82 0.0 0.0
GO:0003735 structural constituent of ribosome 37.01% (47/127) 6.8 0.0 0.0
GO:0006518 peptide metabolic process 37.01% (47/127) 6.62 0.0 0.0
GO:0005622 intracellular anatomical structure 37.8% (48/127) 5.43 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 36.22% (46/127) 6.47 0.0 0.0
GO:0009058 biosynthetic process 38.58% (49/127) 4.17 0.0 0.0
GO:0019538 protein metabolic process 38.58% (49/127) 3.77 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 38.58% (49/127) 3.67 0.0 0.0
GO:0110165 cellular anatomical entity 39.37% (50/127) 3.49 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 37.8% (48/127) 3.53 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 38.58% (49/127) 3.37 0.0 0.0
GO:0005575 cellular_component 40.94% (52/127) 3.15 0.0 0.0
GO:0043170 macromolecule metabolic process 39.37% (50/127) 3.05 0.0 0.0
GO:0006807 nitrogen compound metabolic process 40.16% (51/127) 2.79 0.0 0.0
GO:0044237 cellular metabolic process 39.37% (50/127) 2.75 0.0 0.0
GO:0044238 primary metabolic process 40.16% (51/127) 2.67 0.0 0.0
GO:0071704 organic substance metabolic process 40.16% (51/127) 2.57 0.0 0.0
GO:0008152 metabolic process 40.94% (52/127) 2.48 0.0 0.0
GO:0009987 cellular process 44.88% (57/127) 2.25 0.0 0.0
GO:0008150 biological_process 48.03% (61/127) 2.01 0.0 0.0
GO:0003674 molecular_function 55.91% (71/127) 1.42 0.0 0.0
GO:0003723 RNA binding 4.72% (6/127) 3.18 5.6e-05 0.000271
GO:0019843 rRNA binding 1.57% (2/127) 6.6 0.000156 0.00074
GO:0008097 5S rRNA binding 0.79% (1/127) 7.6 0.005141 0.023729
GO:0008092 cytoskeletal protein binding 2.36% (3/127) 2.92 0.007361 0.033123
GO:0015934 large ribosomal subunit 0.79% (1/127) 6.6 0.010256 0.043956
GO:0044391 ribosomal subunit 0.79% (1/127) 6.6 0.010256 0.043956
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_14 0.044 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_137 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_174 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_175 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_178 0.103 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_180 0.057 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_192 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_240 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_269 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_5 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.058 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_78 0.384 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_196 0.1 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_48 0.482 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_19 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_23 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_85 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_125 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_140 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_141 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_62 0.055 Archaeplastida Compare
Gingko biloba HCCA Cluster_75 0.184 Archaeplastida Compare
Gingko biloba HCCA Cluster_285 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_10 0.243 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_98 0.129 Archaeplastida Compare
Oryza sativa HCCA Cluster_16 0.358 Archaeplastida Compare
Oryza sativa HCCA Cluster_277 0.067 Archaeplastida Compare
Oryza sativa HCCA Cluster_325 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_345 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_379 0.137 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_47 0.221 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_64 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_93 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_94 0.393 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_136 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_190 0.099 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_191 0.239 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.066 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_277 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_292 0.086 Archaeplastida Compare
Picea abies HCCA Cluster_83 0.244 Archaeplastida Compare
Picea abies HCCA Cluster_120 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_185 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_204 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_237 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.078 Archaeplastida Compare
Picea abies HCCA Cluster_414 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_415 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_471 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_17 0.052 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_52 0.169 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_76 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_40 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_55 0.333 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_116 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_269 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_3 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_79 0.123 Archaeplastida Compare
Vitis vinifera HCCA Cluster_98 0.169 Archaeplastida Compare
Vitis vinifera HCCA Cluster_154 0.098 Archaeplastida Compare
Vitis vinifera HCCA Cluster_161 0.219 Archaeplastida Compare
Zea mays HCCA Cluster_89 0.351 Archaeplastida Compare
Zea mays HCCA Cluster_177 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.063 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.13 Archaeplastida Compare
Zea mays HCCA Cluster_297 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_345 0.164 Archaeplastida Compare
Sequences (127) (download table)

InterPro Domains

GO Terms

Family Terms