Coexpression cluster: Cluster_166 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003824 catalytic activity 25.54% (47/184) 1.36 0.0 0.0
GO:0003674 molecular_function 35.87% (66/184) 0.78 2e-06 0.000352
GO:0033014 tetrapyrrole biosynthetic process 2.17% (4/184) 5.07 5e-06 0.000583
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.72% (5/184) 3.96 1.7e-05 0.000639
GO:0004812 aminoacyl-tRNA ligase activity 2.72% (5/184) 3.96 1.7e-05 0.000639
GO:0140101 catalytic activity, acting on a tRNA 3.26% (6/184) 3.65 8e-06 0.000713
GO:0043038 amino acid activation 2.72% (5/184) 4.0 1.5e-05 0.00073
GO:0043039 tRNA aminoacylation 2.72% (5/184) 4.0 1.5e-05 0.00073
GO:0033013 tetrapyrrole metabolic process 2.17% (4/184) 4.82 1.1e-05 0.000732
GO:0006779 porphyrin-containing compound biosynthetic process 1.63% (3/184) 5.48 3.3e-05 0.001143
GO:0006021 inositol biosynthetic process 1.09% (2/184) 7.07 5.5e-05 0.001273
GO:0006020 inositol metabolic process 1.09% (2/184) 7.07 5.5e-05 0.001273
GO:0004512 inositol-3-phosphate synthase activity 1.09% (2/184) 7.07 5.5e-05 0.001273
GO:0004853 uroporphyrinogen decarboxylase activity 1.09% (2/184) 7.07 5.5e-05 0.001273
GO:0006778 porphyrin-containing compound metabolic process 1.63% (3/184) 5.19 6.4e-05 0.001388
GO:0006520 cellular amino acid metabolic process 3.26% (6/184) 3.19 5.1e-05 0.001617
GO:0016831 carboxy-lyase activity 1.63% (3/184) 5.07 8.5e-05 0.001733
GO:0016874 ligase activity 3.26% (6/184) 3.02 9.9e-05 0.00191
GO:0044281 small molecule metabolic process 5.43% (10/184) 2.05 0.000168 0.002767
GO:0016872 intramolecular lyase activity 1.09% (2/184) 6.48 0.000165 0.00285
GO:0009058 biosynthetic process 7.07% (13/184) 1.72 0.000185 0.002906
GO:0006644 phospholipid metabolic process 2.17% (4/184) 3.86 0.000162 0.002957
GO:0006418 tRNA aminoacylation for protein translation 2.17% (4/184) 3.78 0.0002 0.003007
GO:0006399 tRNA metabolic process 2.72% (5/184) 3.18 0.000231 0.003327
GO:0016830 carbon-carbon lyase activity 1.63% (3/184) 4.57 0.000256 0.003543
GO:0008610 lipid biosynthetic process 2.17% (4/184) 3.61 0.00032 0.004107
GO:0019752 carboxylic acid metabolic process 3.26% (6/184) 2.72 0.000311 0.004143
GO:0043436 oxoacid metabolic process 3.26% (6/184) 2.69 0.000355 0.004383
GO:0006082 organic acid metabolic process 3.26% (6/184) 2.62 0.000456 0.005436
GO:1901564 organonitrogen compound metabolic process 9.24% (17/184) 1.31 0.000546 0.005899
GO:0140098 catalytic activity, acting on RNA 3.26% (6/184) 2.59 0.000514 0.005925
GO:0019208 phosphatase regulator activity 1.09% (2/184) 5.75 0.000544 0.006069
GO:1901566 organonitrogen compound biosynthetic process 3.8% (7/184) 2.28 0.000629 0.006596
GO:0034660 ncRNA metabolic process 2.72% (5/184) 2.82 0.000732 0.007237
GO:1901362 organic cyclic compound biosynthetic process 4.35% (8/184) 2.06 0.000732 0.007448
GO:0044255 cellular lipid metabolic process 2.17% (4/184) 3.24 0.000865 0.008313
GO:0008152 metabolic process 14.13% (26/184) 0.94 0.001001 0.009361
GO:1901576 organic substance biosynthetic process 5.98% (11/184) 1.59 0.00117 0.009639
GO:0046165 alcohol biosynthetic process 1.09% (2/184) 5.26 0.001131 0.009781
GO:1901617 organic hydroxy compound biosynthetic process 1.09% (2/184) 5.26 0.001131 0.009781
GO:0046173 polyol biosynthetic process 1.09% (2/184) 5.26 0.001131 0.009781
GO:0008654 phospholipid biosynthetic process 1.63% (3/184) 3.85 0.001161 0.0098
GO:0006629 lipid metabolic process 2.72% (5/184) 2.62 0.001358 0.010925
GO:0019751 polyol metabolic process 1.09% (2/184) 5.07 0.0015 0.011798
GO:1901360 organic cyclic compound metabolic process 7.07% (13/184) 1.37 0.001667 0.012816
GO:0006066 alcohol metabolic process 1.09% (2/184) 4.9 0.001919 0.014438
GO:0044283 small molecule biosynthetic process 2.17% (4/184) 2.9 0.002066 0.015208
GO:1901615 organic hydroxy compound metabolic process 1.09% (2/184) 4.75 0.002388 0.017211
GO:0055114 obsolete oxidation-reduction process 4.35% (8/184) 1.77 0.002532 0.017876
GO:0044249 cellular biosynthetic process 5.43% (10/184) 1.5 0.003133 0.021682
GO:0016491 oxidoreductase activity 4.35% (8/184) 1.68 0.003817 0.025894
GO:0016787 hydrolase activity 7.61% (14/184) 1.14 0.004767 0.03172
GO:0008531 riboflavin kinase activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0035308 negative regulation of protein dephosphorylation 0.54% (1/184) 7.07 0.007449 0.032216
GO:0048584 positive regulation of response to stimulus 0.54% (1/184) 7.07 0.007449 0.032216
GO:0061617 MICOS complex 0.54% (1/184) 7.07 0.007449 0.032216
GO:0019211 phosphatase activator activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0004655 porphobilinogen synthase activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0032515 negative regulation of phosphoprotein phosphatase activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0004865 protein serine/threonine phosphatase inhibitor activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0045747 positive regulation of Notch signaling pathway 0.54% (1/184) 7.07 0.007449 0.032216
GO:0023056 positive regulation of signaling 0.54% (1/184) 7.07 0.007449 0.032216
GO:0009967 positive regulation of signal transduction 0.54% (1/184) 7.07 0.007449 0.032216
GO:0004665 prephenate dehydrogenase (NADP+) activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0006423 cysteinyl-tRNA aminoacylation 0.54% (1/184) 7.07 0.007449 0.032216
GO:0006571 tyrosine biosynthetic process 0.54% (1/184) 7.07 0.007449 0.032216
GO:0008977 prephenate dehydrogenase (NAD+) activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0004817 cysteine-tRNA ligase activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0008593 regulation of Notch signaling pathway 0.54% (1/184) 7.07 0.007449 0.032216
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 0.54% (1/184) 7.07 0.007449 0.032216
GO:0010647 positive regulation of cell communication 0.54% (1/184) 7.07 0.007449 0.032216
GO:0031400 negative regulation of protein modification process 0.54% (1/184) 7.07 0.007449 0.032216
GO:0017038 protein import 0.54% (1/184) 7.07 0.007449 0.032216
GO:0051540 metal cluster binding 1.63% (3/184) 3.07 0.005499 0.035231
GO:0051536 iron-sulfur cluster binding 1.63% (3/184) 3.07 0.005499 0.035231
GO:0034637 cellular carbohydrate biosynthetic process 1.09% (2/184) 4.07 0.006183 0.0382
GO:0051537 2 iron, 2 sulfur cluster binding 1.09% (2/184) 4.07 0.006183 0.0382
GO:0016829 lyase activity 2.72% (5/184) 2.1 0.006514 0.039543
GO:0071704 organic substance metabolic process 11.96% (22/184) 0.82 0.006639 0.039604
GO:0044262 cellular carbohydrate metabolic process 1.09% (2/184) 3.98 0.006973 0.040892
GO:0019438 aromatic compound biosynthetic process 3.26% (6/184) 1.71 0.010498 0.044843
GO:0018130 heterocycle biosynthetic process 3.26% (6/184) 1.71 0.010695 0.045126
GO:0046483 heterocycle metabolic process 5.98% (11/184) 1.16 0.010827 0.045135
GO:0006725 cellular aromatic compound metabolic process 5.98% (11/184) 1.16 0.011055 0.045538
GO:0015995 chlorophyll biosynthetic process 0.54% (1/184) 6.07 0.014842 0.047995
GO:0002161 aminoacyl-tRNA editing activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0006570 tyrosine metabolic process 0.54% (1/184) 6.07 0.014842 0.047995
GO:0015994 chlorophyll metabolic process 0.54% (1/184) 6.07 0.014842 0.047995
GO:0051248 negative regulation of protein metabolic process 0.54% (1/184) 6.07 0.014842 0.047995
GO:0045936 negative regulation of phosphate metabolic process 0.54% (1/184) 6.07 0.014842 0.047995
GO:0004864 protein phosphatase inhibitor activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0010563 negative regulation of phosphorus metabolic process 0.54% (1/184) 6.07 0.014842 0.047995
GO:0010923 negative regulation of phosphatase activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0019212 phosphatase inhibitor activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0016972 thiol oxidase activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0016805 dipeptidase activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0032269 negative regulation of cellular protein metabolic process 0.54% (1/184) 6.07 0.014842 0.047995
GO:0035304 regulation of protein dephosphorylation 0.54% (1/184) 6.07 0.014842 0.047995
GO:0035305 negative regulation of dephosphorylation 0.54% (1/184) 6.07 0.014842 0.047995
GO:0043666 regulation of phosphoprotein phosphatase activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0004425 indole-3-glycerol-phosphate synthase activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0031072 heat shock protein binding 0.54% (1/184) 6.07 0.014842 0.047995
GO:0016880 acid-ammonia (or amide) ligase activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0004356 glutamate-ammonia ligase activity 0.54% (1/184) 6.07 0.014842 0.047995
GO:0016211 ammonia ligase activity 0.54% (1/184) 6.07 0.014842 0.047995
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_107 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_125 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_116 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_34 0.043 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_21 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_35 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_51 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_53 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_55 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_63 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_76 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_85 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_88 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_89 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_91 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_93 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_102 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_106 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_118 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_120 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_146 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_160 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_170 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_177 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_186 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_194 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_197 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_200 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_64 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_238 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_35 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_59 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_92 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_47 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_159 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_447 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_463 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_67 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_183 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_13 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_89 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_188 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_13 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_179 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_14 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_55 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.019 Archaeplastida Compare
Sequences (184) (download table)

InterPro Domains

GO Terms

Family Terms