Coexpression cluster: Cluster_38 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005975 carbohydrate metabolic process 16.13% (10/62) 5.05 0.0 0.0
GO:0008152 metabolic process 32.26% (20/62) 2.13 0.0 1e-06
GO:0016853 isomerase activity 9.68% (6/62) 5.01 0.0 2e-06
GO:0003824 catalytic activity 35.48% (22/62) 1.83 0.0 3e-06
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 4.84% (3/62) 7.64 0.0 1.4e-05
GO:0003674 molecular_function 50.0% (31/62) 1.26 0.0 1.4e-05
GO:0071704 organic substance metabolic process 27.42% (17/62) 2.02 0.0 1.6e-05
GO:0016860 intramolecular oxidoreductase activity 4.84% (3/62) 7.22 1e-06 2.5e-05
GO:0008150 biological_process 35.48% (22/62) 1.57 1e-06 3.5e-05
GO:0046034 ATP metabolic process 6.45% (4/62) 5.55 2e-06 3.7e-05
GO:1901135 carbohydrate derivative metabolic process 8.06% (5/62) 4.53 3e-06 5.4e-05
GO:0009150 purine ribonucleotide metabolic process 6.45% (4/62) 5.28 3e-06 5.7e-05
GO:0019693 ribose phosphate metabolic process 6.45% (4/62) 5.28 3e-06 5.7e-05
GO:0009259 ribonucleotide metabolic process 6.45% (4/62) 5.28 3e-06 5.7e-05
GO:0006163 purine nucleotide metabolic process 6.45% (4/62) 5.18 5e-06 7.1e-05
GO:0072521 purine-containing compound metabolic process 6.45% (4/62) 5.08 6e-06 8.7e-05
GO:0044238 primary metabolic process 22.58% (14/62) 1.84 2.4e-05 0.000337
GO:0006091 generation of precursor metabolites and energy 4.84% (3/62) 5.27 6.4e-05 0.000844
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0015985 energy coupled proton transport, down electrochemical gradient 3.23% (2/62) 6.64 0.000172 0.001449
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0009144 purine nucleoside triphosphate metabolic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0009142 nucleoside triphosphate biosynthetic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0015986 ATP synthesis coupled proton transport 3.23% (2/62) 6.64 0.000172 0.001449
GO:0009199 ribonucleoside triphosphate metabolic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0006754 ATP biosynthetic process 3.23% (2/62) 6.64 0.000172 0.001449
GO:0019637 organophosphate metabolic process 8.06% (5/62) 3.22 0.000202 0.001642
GO:0044237 cellular metabolic process 19.35% (12/62) 1.72 0.000221 0.001738
GO:0009141 nucleoside triphosphate metabolic process 3.23% (2/62) 6.18 0.000336 0.002558
GO:0009058 biosynthetic process 11.29% (7/62) 2.39 0.000361 0.002661
GO:1902600 proton transmembrane transport 3.23% (2/62) 6.05 0.000403 0.002879
GO:0009152 purine ribonucleotide biosynthetic process 3.23% (2/62) 5.94 0.000475 0.003113
GO:0046390 ribose phosphate biosynthetic process 3.23% (2/62) 5.94 0.000475 0.003113
GO:0009260 ribonucleotide biosynthetic process 3.23% (2/62) 5.94 0.000475 0.003113
GO:0033014 tetrapyrrole biosynthetic process 3.23% (2/62) 5.64 0.000727 0.004516
GO:0006164 purine nucleotide biosynthetic process 3.23% (2/62) 5.64 0.000727 0.004516
GO:0009117 nucleotide metabolic process 6.45% (4/62) 3.27 0.000792 0.004793
GO:0006753 nucleoside phosphate metabolic process 6.45% (4/62) 3.25 0.000847 0.004997
GO:0033013 tetrapyrrole metabolic process 3.23% (2/62) 5.39 0.001031 0.005794
GO:0072522 purine-containing compound biosynthetic process 3.23% (2/62) 5.39 0.001031 0.005794
GO:0098796 membrane protein complex 4.84% (3/62) 3.9 0.001078 0.005917
GO:0009132 nucleoside diphosphate metabolic process 3.23% (2/62) 5.05 0.001651 0.006284
GO:0046031 ADP metabolic process 3.23% (2/62) 5.05 0.001651 0.006284
GO:0009179 purine ribonucleoside diphosphate metabolic process 3.23% (2/62) 5.05 0.001651 0.006284
GO:0006096 glycolytic process 3.23% (2/62) 5.05 0.001651 0.006284
GO:0006757 ATP generation from ADP 3.23% (2/62) 5.05 0.001651 0.006284
GO:0006165 nucleoside diphosphate phosphorylation 3.23% (2/62) 5.05 0.001651 0.006284
GO:0009135 purine nucleoside diphosphate metabolic process 3.23% (2/62) 5.05 0.001651 0.006284
GO:0009185 ribonucleoside diphosphate metabolic process 3.23% (2/62) 5.05 0.001651 0.006284
GO:0046939 nucleotide phosphorylation 3.23% (2/62) 5.05 0.001651 0.006284
GO:1901576 organic substance biosynthetic process 9.68% (6/62) 2.29 0.00142 0.006445
GO:1901360 organic cyclic compound metabolic process 11.29% (7/62) 2.05 0.001449 0.006451
GO:0098660 inorganic ion transmembrane transport 3.23% (2/62) 5.18 0.001386 0.006543
GO:0098662 inorganic cation transmembrane transport 3.23% (2/62) 5.18 0.001386 0.006543
GO:0098655 cation transmembrane transport 3.23% (2/62) 5.18 0.001386 0.006543
GO:1901566 organonitrogen compound biosynthetic process 6.45% (4/62) 3.05 0.001415 0.006547
GO:0044281 small molecule metabolic process 8.06% (5/62) 2.62 0.001321 0.006635
GO:0006725 cellular aromatic compound metabolic process 11.29% (7/62) 2.07 0.001318 0.006763
GO:0046483 heterocycle metabolic process 11.29% (7/62) 2.08 0.001296 0.006795
GO:0055086 nucleobase-containing small molecule metabolic process 6.45% (4/62) 3.08 0.001285 0.00689
GO:0006796 phosphate-containing compound metabolic process 9.68% (6/62) 2.19 0.001974 0.007165
GO:0006793 phosphorus metabolic process 9.68% (6/62) 2.19 0.001974 0.007165
GO:0006090 pyruvate metabolic process 3.23% (2/62) 4.94 0.001938 0.007259
GO:0016052 carbohydrate catabolic process 3.23% (2/62) 4.88 0.002089 0.00736
GO:0016051 carbohydrate biosynthetic process 3.23% (2/62) 4.88 0.002089 0.00736
GO:0034220 ion transmembrane transport 3.23% (2/62) 4.83 0.002246 0.007797
GO:0006420 arginyl-tRNA aminoacylation 1.61% (1/62) 8.64 0.00251 0.008227
GO:0009052 pentose-phosphate shunt, non-oxidative branch 1.61% (1/62) 8.64 0.00251 0.008227
GO:0004814 arginine-tRNA ligase activity 1.61% (1/62) 8.64 0.00251 0.008227
GO:0004751 ribose-5-phosphate isomerase activity 1.61% (1/62) 8.64 0.00251 0.008227
GO:0015078 proton transmembrane transporter activity 3.23% (2/62) 4.73 0.002577 0.008331
GO:0034641 cellular nitrogen compound metabolic process 11.29% (7/62) 1.89 0.00269 0.008579
GO:0032787 monocarboxylic acid metabolic process 3.23% (2/62) 4.59 0.003113 0.009795
GO:1901137 carbohydrate derivative biosynthetic process 3.23% (2/62) 4.55 0.003302 0.010254
GO:0019438 aromatic compound biosynthetic process 6.45% (4/62) 2.7 0.003406 0.010441
GO:0018130 heterocycle biosynthetic process 6.45% (4/62) 2.69 0.003456 0.010457
GO:0019752 carboxylic acid metabolic process 4.84% (3/62) 3.29 0.003595 0.01074
GO:0043436 oxoacid metabolic process 4.84% (3/62) 3.26 0.003849 0.011354
GO:1901362 organic cyclic compound biosynthetic process 6.45% (4/62) 2.63 0.004035 0.011757
GO:0006082 organic acid metabolic process 4.84% (3/62) 3.19 0.004388 0.012629
GO:0009987 cellular process 20.97% (13/62) 1.15 0.004603 0.013089
GO:0004418 hydroxymethylbilane synthase activity 1.61% (1/62) 7.64 0.005014 0.0136
GO:0004807 triose-phosphate isomerase activity 1.61% (1/62) 7.64 0.005014 0.0136
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 1.61% (1/62) 7.64 0.005014 0.0136
GO:0004347 glucose-6-phosphate isomerase activity 1.61% (1/62) 7.64 0.005014 0.0136
GO:0044249 cellular biosynthetic process 8.06% (5/62) 2.07 0.006838 0.018337
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.61% (1/62) 7.05 0.007511 0.019061
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 1.61% (1/62) 7.05 0.007511 0.019061
GO:0004109 coproporphyrinogen oxidase activity 1.61% (1/62) 7.05 0.007511 0.019061
GO:0004618 phosphoglycerate kinase activity 1.61% (1/62) 7.05 0.007511 0.019061
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.61% (1/62) 7.05 0.007511 0.019061
GO:1901564 organonitrogen compound metabolic process 11.29% (7/62) 1.6 0.008055 0.020224
GO:0044271 cellular nitrogen compound biosynthetic process 6.45% (4/62) 2.25 0.010101 0.02337
GO:0016491 oxidoreductase activity 6.45% (4/62) 2.25 0.010101 0.02337
GO:0004427 inorganic diphosphatase activity 1.61% (1/62) 6.64 0.010002 0.023606
GO:0070569 uridylyltransferase activity 1.61% (1/62) 6.64 0.010002 0.023606
GO:0016832 aldehyde-lyase activity 1.61% (1/62) 6.64 0.010002 0.023606
GO:0015252 proton channel activity 1.61% (1/62) 6.64 0.010002 0.023606
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.61% (1/62) 6.64 0.010002 0.023606
GO:0016868 intramolecular transferase activity, phosphotransferases 1.61% (1/62) 6.64 0.010002 0.023606
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.84% (3/62) 2.73 0.010505 0.024069
GO:0046364 monosaccharide biosynthetic process 1.61% (1/62) 6.32 0.012488 0.027288
GO:0016854 racemase and epimerase activity 1.61% (1/62) 6.32 0.012488 0.027288
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 1.61% (1/62) 6.32 0.012488 0.027288
GO:0006094 gluconeogenesis 1.61% (1/62) 6.32 0.012488 0.027288
GO:0019319 hexose biosynthetic process 1.61% (1/62) 6.32 0.012488 0.027288
GO:1901575 organic substance catabolic process 3.23% (2/62) 3.49 0.013782 0.029569
GO:0015075 ion transmembrane transporter activity 4.84% (3/62) 2.59 0.013749 0.02977
GO:0046854 phosphatidylinositol phosphorylation 1.61% (1/62) 6.05 0.014967 0.029934
GO:0046834 lipid phosphorylation 1.61% (1/62) 6.05 0.014967 0.029934
GO:0030089 phycobilisome 1.61% (1/62) 6.05 0.014967 0.029934
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.61% (1/62) 6.05 0.014967 0.029934
GO:0030076 light-harvesting complex 1.61% (1/62) 6.05 0.014967 0.029934
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.61% (1/62) 6.05 0.014967 0.029934
GO:0022890 inorganic cation transmembrane transporter activity 3.23% (2/62) 3.45 0.014529 0.03089
GO:0009056 catabolic process 3.23% (2/62) 3.43 0.014908 0.031414
GO:0072348 sulfur compound transport 1.61% (1/62) 5.83 0.01744 0.034015
GO:0008272 sulfate transport 1.61% (1/62) 5.83 0.01744 0.034015
GO:0015116 sulfate transmembrane transporter activity 1.61% (1/62) 5.83 0.01744 0.034015
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 1.61% (1/62) 5.64 0.019907 0.037887
GO:0006006 glucose metabolic process 1.61% (1/62) 5.64 0.019907 0.037887
GO:0006139 nucleobase-containing compound metabolic process 8.06% (5/62) 1.68 0.019731 0.038168
GO:0030258 lipid modification 1.61% (1/62) 5.47 0.022367 0.040295
GO:1901682 sulfur compound transmembrane transporter activity 1.61% (1/62) 5.47 0.022367 0.040295
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.61% (1/62) 5.47 0.022367 0.040295
GO:0006779 porphyrin-containing compound biosynthetic process 1.61% (1/62) 5.47 0.022367 0.040295
GO:0005261 cation channel activity 1.61% (1/62) 5.47 0.022367 0.040295
GO:0050661 NADP binding 1.61% (1/62) 5.47 0.022367 0.040295
GO:0008324 cation transmembrane transporter activity 3.23% (2/62) 3.15 0.021548 0.040683
GO:0006812 cation transport 3.23% (2/62) 3.08 0.023368 0.041779
GO:0005575 cellular_component 11.29% (7/62) 1.29 0.023667 0.041996
GO:0046351 disaccharide biosynthetic process 1.61% (1/62) 5.32 0.024822 0.042449
GO:0005992 trehalose biosynthetic process 1.61% (1/62) 5.32 0.024822 0.042449
GO:0005984 disaccharide metabolic process 1.61% (1/62) 5.32 0.024822 0.042449
GO:0005991 trehalose metabolic process 1.61% (1/62) 5.32 0.024822 0.042449
GO:0019318 hexose metabolic process 1.61% (1/62) 5.32 0.024822 0.042449
GO:0016874 ligase activity 3.23% (2/62) 3.01 0.025728 0.043682
GO:0006810 transport 6.45% (4/62) 1.82 0.026464 0.044612
GO:0051234 establishment of localization 6.45% (4/62) 1.82 0.026841 0.044926
GO:0006778 porphyrin-containing compound metabolic process 1.61% (1/62) 5.18 0.027271 0.045006
GO:0005996 monosaccharide metabolic process 1.61% (1/62) 5.18 0.027271 0.045006
GO:0051179 localization 6.45% (4/62) 1.8 0.027797 0.045556
GO:0055085 transmembrane transport 4.84% (3/62) 2.18 0.02875 0.046793
GO:0046488 phosphatidylinositol metabolic process 1.61% (1/62) 5.05 0.029713 0.04803
GO:0022857 transmembrane transporter activity 4.84% (3/62) 2.14 0.030729 0.049334
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_216 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_227 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_62 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_116 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_34 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_99 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_124 0.044 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_151 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_201 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_64 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_300 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_11 0.08 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_35 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_98 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_142 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_47 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_287 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_307 0.038 Archaeplastida Compare
Picea abies HCCA Cluster_4 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_250 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_302 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_417 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_13 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_69 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_135 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_171 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_231 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_117 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_168 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_164 0.067 Archaeplastida Compare
Zea mays HCCA Cluster_189 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_272 0.034 Archaeplastida Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms