Coexpression cluster: Cluster_63 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901363 heterocyclic compound binding 32.73% (36/110) 1.81 0.0 0.0
GO:0097159 organic cyclic compound binding 32.73% (36/110) 1.81 0.0 0.0
GO:0003723 RNA binding 11.82% (13/110) 3.83 0.0 0.0
GO:0003743 translation initiation factor activity 5.45% (6/110) 6.11 0.0 0.0
GO:0005488 binding 40.91% (45/110) 1.4 0.0 0.0
GO:0045182 translation regulator activity 5.45% (6/110) 5.53 0.0 0.0
GO:0090079 translation regulator activity, nucleic acid binding 5.45% (6/110) 5.53 0.0 0.0
GO:0008135 translation factor activity, RNA binding 5.45% (6/110) 5.53 0.0 0.0
GO:0003676 nucleic acid binding 18.18% (20/110) 2.35 0.0 0.0
GO:0016874 ligase activity 7.27% (8/110) 4.09 0.0 1e-06
GO:0140101 catalytic activity, acting on a tRNA 5.45% (6/110) 4.22 1e-06 1.8e-05
GO:0005852 eukaryotic translation initiation factor 3 complex 2.73% (3/110) 6.92 1e-06 1.9e-05
GO:0004812 aminoacyl-tRNA ligase activity 4.55% (5/110) 4.7 1e-06 2.2e-05
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.55% (5/110) 4.7 1e-06 2.2e-05
GO:0003674 molecular_function 48.18% (53/110) 0.81 3e-06 4.3e-05
GO:0140098 catalytic activity, acting on RNA 6.36% (7/110) 3.4 5e-06 7.1e-05
GO:0006082 organic acid metabolic process 6.36% (7/110) 3.33 6e-06 9e-05
GO:0043039 tRNA aminoacylation 3.64% (4/110) 4.43 3.4e-05 0.000444
GO:0043038 amino acid activation 3.64% (4/110) 4.43 3.4e-05 0.000444
GO:0006413 translational initiation 2.73% (3/110) 5.46 3.7e-05 0.00046
GO:0006520 cellular amino acid metabolic process 4.55% (5/110) 3.63 5.1e-05 0.000609
GO:0019752 carboxylic acid metabolic process 5.45% (6/110) 3.18 5.4e-05 0.00061
GO:0043436 oxoacid metabolic process 5.45% (6/110) 3.16 5.7e-05 0.000614
GO:0036094 small molecule binding 16.36% (18/110) 1.43 0.000104 0.00108
GO:0044281 small molecule metabolic process 8.18% (9/110) 2.25 0.000119 0.00118
GO:0043168 anion binding 15.45% (17/110) 1.42 0.000186 0.001777
GO:0016879 ligase activity, forming carbon-nitrogen bonds 2.73% (3/110) 4.6 0.000245 0.002258
GO:0008312 7S RNA binding 1.82% (2/110) 6.01 0.000376 0.003231
GO:0048500 signal recognition particle 1.82% (2/110) 6.01 0.000376 0.003231
GO:0008104 protein localization 3.64% (4/110) 3.27 0.000794 0.003409
GO:0033036 macromolecule localization 3.64% (4/110) 3.27 0.000794 0.003409
GO:0045047 protein targeting to ER 1.82% (2/110) 5.53 0.000784 0.003486
GO:0070972 protein localization to endoplasmic reticulum 1.82% (2/110) 5.53 0.000784 0.003486
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.82% (2/110) 5.53 0.000784 0.003486
GO:0072657 protein localization to membrane 1.82% (2/110) 5.53 0.000784 0.003486
GO:0006612 protein targeting to membrane 1.82% (2/110) 5.53 0.000784 0.003486
GO:0090150 establishment of protein localization to membrane 1.82% (2/110) 5.53 0.000784 0.003486
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.82% (2/110) 5.53 0.000784 0.003486
GO:0006613 cotranslational protein targeting to membrane 1.82% (2/110) 5.53 0.000784 0.003486
GO:0032550 purine ribonucleoside binding 4.55% (5/110) 2.89 0.000586 0.003645
GO:0032561 guanyl ribonucleotide binding 4.55% (5/110) 2.89 0.000586 0.003645
GO:0032549 ribonucleoside binding 4.55% (5/110) 2.89 0.000586 0.003645
GO:0019001 guanyl nucleotide binding 4.55% (5/110) 2.89 0.000586 0.003645
GO:0001883 purine nucleoside binding 4.55% (5/110) 2.89 0.000586 0.003645
GO:0001882 nucleoside binding 4.55% (5/110) 2.89 0.000586 0.003645
GO:0005525 GTP binding 4.55% (5/110) 2.89 0.000586 0.003645
GO:0032555 purine ribonucleotide binding 13.64% (15/110) 1.38 0.000607 0.003687
GO:0017076 purine nucleotide binding 13.64% (15/110) 1.38 0.000628 0.003721
GO:0015833 peptide transport 3.64% (4/110) 3.29 0.00075 0.003892
GO:0042886 amide transport 3.64% (4/110) 3.29 0.00075 0.003892
GO:0045184 establishment of protein localization 3.64% (4/110) 3.29 0.00075 0.003892
GO:0015031 protein transport 3.64% (4/110) 3.29 0.00075 0.003892
GO:0032553 ribonucleotide binding 13.64% (15/110) 1.36 0.000685 0.003969
GO:0097367 carbohydrate derivative binding 13.64% (15/110) 1.36 0.000724 0.004095
GO:0006605 protein targeting 1.82% (2/110) 5.33 0.001041 0.00432
GO:0000049 tRNA binding 1.82% (2/110) 5.33 0.001041 0.00432
GO:0006399 tRNA metabolic process 3.64% (4/110) 3.43 0.000522 0.004335
GO:0035639 purine ribonucleoside triphosphate binding 13.64% (15/110) 1.39 0.000581 0.004381
GO:1901265 nucleoside phosphate binding 14.55% (16/110) 1.33 0.000564 0.004387
GO:0000166 nucleotide binding 14.55% (16/110) 1.33 0.000564 0.004387
GO:0034660 ncRNA metabolic process 3.64% (4/110) 3.01 0.001541 0.006289
GO:0033365 protein localization to organelle 1.82% (2/110) 5.01 0.00166 0.006559
GO:0072594 establishment of protein localization to organelle 1.82% (2/110) 5.01 0.00166 0.006559
GO:0071702 organic substance transport 3.64% (4/110) 2.96 0.001765 0.006867
GO:0005737 cytoplasm 2.73% (3/110) 3.6 0.001939 0.007316
GO:0016053 organic acid biosynthetic process 2.73% (3/110) 3.6 0.001939 0.007316
GO:0070727 cellular macromolecule localization 1.82% (2/110) 4.87 0.00202 0.007397
GO:0034613 cellular protein localization 1.82% (2/110) 4.87 0.00202 0.007397
GO:0005515 protein binding 10.91% (12/110) 1.38 0.002238 0.008078
GO:0071705 nitrogen compound transport 3.64% (4/110) 2.86 0.002279 0.008108
GO:0006886 intracellular protein transport 2.73% (3/110) 3.27 0.003678 0.0129
GO:0017196 N-terminal peptidyl-methionine acetylation 0.91% (1/110) 7.33 0.0062 0.017544
GO:0006474 N-terminal protein amino acid acetylation 0.91% (1/110) 7.33 0.0062 0.017544
GO:0003883 CTP synthase activity 0.91% (1/110) 7.33 0.0062 0.017544
GO:0004826 phenylalanine-tRNA ligase activity 0.91% (1/110) 7.33 0.0062 0.017544
GO:0031369 translation initiation factor binding 0.91% (1/110) 7.33 0.0062 0.017544
GO:0004592 pantoate-beta-alanine ligase activity 0.91% (1/110) 7.33 0.0062 0.017544
GO:0004814 arginine-tRNA ligase activity 0.91% (1/110) 7.33 0.0062 0.017544
GO:0006420 arginyl-tRNA aminoacylation 0.91% (1/110) 7.33 0.0062 0.017544
GO:0006221 pyrimidine nucleotide biosynthetic process 0.91% (1/110) 7.33 0.0062 0.017544
GO:0004107 chorismate synthase activity 0.91% (1/110) 7.33 0.0062 0.017544
GO:0006220 pyrimidine nucleotide metabolic process 0.91% (1/110) 7.33 0.0062 0.017544
GO:0018206 peptidyl-methionine modification 0.91% (1/110) 7.33 0.0062 0.017544
GO:0004019 adenylosuccinate synthase activity 0.91% (1/110) 7.33 0.0062 0.017544
GO:0031414 N-terminal protein acetyltransferase complex 0.91% (1/110) 7.33 0.0062 0.017544
GO:0031417 NatC complex 0.91% (1/110) 7.33 0.0062 0.017544
GO:0043167 ion binding 15.45% (17/110) 0.98 0.005089 0.0176
GO:0006820 anion transport 3.64% (4/110) 2.51 0.005368 0.018309
GO:0046907 intracellular transport 2.73% (3/110) 2.96 0.006727 0.018611
GO:0051649 establishment of localization in cell 2.73% (3/110) 2.96 0.006727 0.018611
GO:1990904 ribonucleoprotein complex 1.82% (2/110) 3.87 0.008116 0.022207
GO:0006418 tRNA aminoacylation for protein translation 1.82% (2/110) 3.81 0.008853 0.023961
GO:0051641 cellular localization 2.73% (3/110) 2.79 0.009395 0.025155
GO:0044283 small molecule biosynthetic process 2.73% (3/110) 2.77 0.009766 0.02587
GO:0016070 RNA metabolic process 4.55% (5/110) 1.94 0.00995 0.026079
GO:0015940 pantothenate biosynthetic process 0.91% (1/110) 6.33 0.012363 0.029317
GO:0005786 signal recognition particle, endoplasmic reticulum targeting 0.91% (1/110) 6.33 0.012363 0.029317
GO:0030942 endoplasmic reticulum signal peptide binding 0.91% (1/110) 6.33 0.012363 0.029317
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 0.91% (1/110) 6.33 0.012363 0.029317
GO:0005047 signal recognition particle binding 0.91% (1/110) 6.33 0.012363 0.029317
GO:0030261 chromosome condensation 0.91% (1/110) 6.33 0.012363 0.029317
GO:0015939 pantothenate metabolic process 0.91% (1/110) 6.33 0.012363 0.029317
GO:0006323 DNA packaging 0.91% (1/110) 6.33 0.012363 0.029317
GO:0016838 carbon-oxygen lyase activity, acting on phosphates 0.91% (1/110) 6.33 0.012363 0.029317
GO:0031365 N-terminal protein amino acid modification 0.91% (1/110) 6.33 0.012363 0.029317
GO:1901566 organonitrogen compound biosynthetic process 4.55% (5/110) 1.84 0.013109 0.030795
GO:0070279 vitamin B6 binding 1.82% (2/110) 3.33 0.01674 0.038594
GO:0030170 pyridoxal phosphate binding 1.82% (2/110) 3.33 0.01674 0.038594
GO:0009089 lysine biosynthetic process via diaminopimelate 0.91% (1/110) 5.75 0.018487 0.039683
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 0.91% (1/110) 5.75 0.018487 0.039683
GO:0006553 lysine metabolic process 0.91% (1/110) 5.75 0.018487 0.039683
GO:0009085 lysine biosynthetic process 0.91% (1/110) 5.75 0.018487 0.039683
GO:0004045 aminoacyl-tRNA hydrolase activity 0.91% (1/110) 5.75 0.018487 0.039683
GO:0043648 dicarboxylic acid metabolic process 0.91% (1/110) 5.75 0.018487 0.039683
GO:0046451 diaminopimelate metabolic process 0.91% (1/110) 5.75 0.018487 0.039683
GO:0006725 cellular aromatic compound metabolic process 7.27% (8/110) 1.28 0.017674 0.040375
GO:0046394 carboxylic acid biosynthetic process 1.82% (2/110) 3.2 0.019841 0.042225
GO:0032991 protein-containing complex 5.45% (6/110) 1.49 0.020266 0.042765
GO:1901360 organic cyclic compound metabolic process 7.27% (8/110) 1.24 0.020702 0.043318
GO:0043021 ribonucleoprotein complex binding 0.91% (1/110) 5.33 0.024574 0.049346
GO:0070569 uridylyltransferase activity 0.91% (1/110) 5.33 0.024574 0.049346
GO:1902493 acetyltransferase complex 0.91% (1/110) 5.33 0.024574 0.049346
GO:0031248 protein acetyltransferase complex 0.91% (1/110) 5.33 0.024574 0.049346
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_180 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_184 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_186 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_141 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_181 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_199 0.038 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_171 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_82 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_331 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_53 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_98 0.08 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_123 0.037 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_146 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_78 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.084 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.047 Archaeplastida Compare
Oryza sativa HCCA Cluster_380 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_1 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_113 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_221 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_227 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_229 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_282 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_176 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_212 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_237 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_487 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_37 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_85 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_139 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_155 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.052 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_3 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_145 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_150 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_212 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_13 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_28 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_59 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_162 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.05 Archaeplastida Compare
Sequences (110) (download table)

InterPro Domains

GO Terms

Family Terms