Coexpression cluster: Cluster_27 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006886 intracellular protein transport 10.09% (11/109) 5.16 0.0 0.0
GO:0008104 protein localization 10.09% (11/109) 4.74 0.0 0.0
GO:0033036 macromolecule localization 10.09% (11/109) 4.74 0.0 0.0
GO:0015833 peptide transport 10.09% (11/109) 4.76 0.0 0.0
GO:0015031 protein transport 10.09% (11/109) 4.76 0.0 0.0
GO:0042886 amide transport 10.09% (11/109) 4.76 0.0 0.0
GO:0045184 establishment of protein localization 10.09% (11/109) 4.76 0.0 0.0
GO:0046907 intracellular transport 10.09% (11/109) 4.85 0.0 0.0
GO:0051649 establishment of localization in cell 10.09% (11/109) 4.85 0.0 0.0
GO:0030117 membrane coat 6.42% (7/109) 6.45 0.0 0.0
GO:0051641 cellular localization 10.09% (11/109) 4.68 0.0 0.0
GO:0006820 anion transport 11.93% (13/109) 4.23 0.0 0.0
GO:0071702 organic substance transport 11.01% (12/109) 4.56 0.0 0.0
GO:0016192 vesicle-mediated transport 9.17% (10/109) 4.76 0.0 0.0
GO:0051179 localization 18.35% (20/109) 2.85 0.0 0.0
GO:0071705 nitrogen compound transport 10.09% (11/109) 4.33 0.0 0.0
GO:0051234 establishment of localization 16.51% (18/109) 2.72 0.0 0.0
GO:0006810 transport 16.51% (18/109) 2.72 0.0 0.0
GO:0017119 Golgi transport complex 3.67% (4/109) 7.35 0.0 0.0
GO:0006811 ion transport 11.93% (13/109) 3.02 0.0 0.0
GO:0048193 Golgi vesicle transport 4.59% (5/109) 5.76 0.0 0.0
GO:0030120 vesicle coat 3.67% (4/109) 6.54 0.0 1e-06
GO:0005575 cellular_component 22.94% (25/109) 1.71 0.0 1e-06
GO:0099023 vesicle tethering complex 3.67% (4/109) 5.89 0.0 5e-06
GO:0030127 COPII vesicle coat 2.75% (3/109) 6.93 1e-06 9e-06
GO:0032991 protein-containing complex 11.01% (12/109) 2.51 1e-06 1.3e-05
GO:0098796 membrane protein complex 6.42% (7/109) 3.65 1e-06 1.4e-05
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 2.75% (3/109) 6.35 4e-06 4.1e-05
GO:0033218 amide binding 2.75% (3/109) 5.61 2.6e-05 0.000232
GO:0051651 maintenance of location in cell 1.83% (2/109) 6.76 0.000112 0.000795
GO:0032507 maintenance of protein location in cell 1.83% (2/109) 6.76 0.000112 0.000795
GO:0006621 protein retention in ER lumen 1.83% (2/109) 6.76 0.000112 0.000795
GO:0035437 maintenance of protein localization in endoplasmic reticulum 1.83% (2/109) 6.76 0.000112 0.000795
GO:0072595 maintenance of protein localization in organelle 1.83% (2/109) 6.76 0.000112 0.000795
GO:0046923 ER retention sequence binding 1.83% (2/109) 6.76 0.000112 0.000795
GO:0045185 maintenance of protein location 1.83% (2/109) 6.76 0.000112 0.000795
GO:0051235 maintenance of location 1.83% (2/109) 6.35 0.000223 0.0015
GO:0006891 intra-Golgi vesicle-mediated transport 1.83% (2/109) 6.35 0.000223 0.0015
GO:0042277 peptide binding 1.83% (2/109) 6.02 0.00037 0.002365
GO:0005048 signal sequence binding 1.83% (2/109) 6.02 0.00037 0.002365
GO:0009987 cellular process 23.85% (26/109) 0.9 0.001115 0.006963
GO:0110165 cellular anatomical entity 11.93% (13/109) 1.15 0.005525 0.033676
GO:0030126 COPI vesicle coat 0.92% (1/109) 7.35 0.006144 0.034193
GO:0004817 cysteine-tRNA ligase activity 0.92% (1/109) 7.35 0.006144 0.034193
GO:0006423 cysteinyl-tRNA aminoacylation 0.92% (1/109) 7.35 0.006144 0.034193
GO:0005801 cis-Golgi network 0.92% (1/109) 7.35 0.006144 0.034193
GO:0016021 integral component of membrane 5.5% (6/109) 1.84 0.006797 0.035511
GO:0031224 intrinsic component of membrane 5.5% (6/109) 1.84 0.006797 0.035511
GO:0008150 biological_process 25.69% (28/109) 0.68 0.0067 0.036493
GO:0065008 regulation of biological quality 2.75% (3/109) 2.89 0.007798 0.039924
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_231 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_40 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_120 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_247 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_18 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_147 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_152 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_25 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_161 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_165 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_240 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_322 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_60 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_78 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_90 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_139 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_118 0.061 Archaeplastida Compare
Oryza sativa HCCA Cluster_301 0.046 Archaeplastida Compare
Oryza sativa HCCA Cluster_366 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_16 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_113 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_205 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_258 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_261 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_274 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_295 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_25 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_35 0.043 Archaeplastida Compare
Picea abies HCCA Cluster_291 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_479 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_527 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_531 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_65 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_125 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_123 0.044 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_174 0.046 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_225 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_113 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_118 0.047 Archaeplastida Compare
Vitis vinifera HCCA Cluster_150 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_8 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_24 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_59 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_72 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_75 0.053 Archaeplastida Compare
Zea mays HCCA Cluster_200 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_332 0.055 Archaeplastida Compare
Sequences (109) (download table)

InterPro Domains

GO Terms

Family Terms