Coexpression cluster: Cluster_9 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016740 transferase activity 21.33% (16/75) 1.85 7e-06 0.001298
GO:0006766 vitamin metabolic process 4.0% (3/75) 5.38 4.7e-05 0.00156
GO:0006767 water-soluble vitamin metabolic process 4.0% (3/75) 5.38 4.7e-05 0.00156
GO:0003824 catalytic activity 34.67% (26/75) 1.22 1.6e-05 0.001608
GO:0009110 vitamin biosynthetic process 4.0% (3/75) 5.47 3.9e-05 0.001934
GO:0042364 water-soluble vitamin biosynthetic process 4.0% (3/75) 5.47 3.9e-05 0.001934
GO:0003674 molecular_function 48.0% (36/75) 0.81 0.00011 0.002733
GO:0009236 cobalamin biosynthetic process 2.67% (2/75) 6.89 0.000105 0.002976
GO:0009235 cobalamin metabolic process 2.67% (2/75) 6.56 0.000175 0.003848
GO:0044283 small molecule biosynthetic process 5.33% (4/75) 3.74 0.000231 0.004574
GO:0016757 transferase activity, transferring glycosyl groups 5.33% (4/75) 3.24 0.00085 0.015301
GO:0016021 integral component of membrane 8.0% (6/75) 2.38 0.001041 0.015854
GO:0031224 intrinsic component of membrane 8.0% (6/75) 2.38 0.001041 0.015854
GO:0008150 biological_process 30.67% (23/75) 0.93 0.001189 0.016816
GO:0016782 transferase activity, transferring sulfur-containing groups 2.67% (2/75) 4.98 0.001787 0.016847
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 2.67% (2/75) 4.98 0.001787 0.016847
GO:0008146 sulfotransferase activity 2.67% (2/75) 4.98 0.001787 0.016847
GO:0070085 glycosylation 4.0% (3/75) 3.72 0.001542 0.016959
GO:1901564 organonitrogen compound metabolic process 17.33% (13/75) 1.35 0.001476 0.017191
GO:0043413 macromolecule glycosylation 4.0% (3/75) 3.74 0.001461 0.018074
GO:0006486 protein glycosylation 4.0% (3/75) 3.74 0.001461 0.018074
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0042819 vitamin B6 biosynthetic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0042816 vitamin B6 metabolic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0004359 glutaminase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0046184 aldehyde biosynthetic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0031419 cobalamin binding 1.33% (1/75) 7.89 0.004228 0.01993
GO:0046500 S-adenosylmethionine metabolic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0008172 S-methyltransferase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0006556 S-adenosylmethionine biosynthetic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0008818 cobalamin 5'-phosphate synthase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0042822 pyridoxal phosphate metabolic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0006555 methionine metabolic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0004478 methionine adenosyltransferase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0042823 pyridoxal phosphate biosynthetic process 1.33% (1/75) 7.89 0.004228 0.01993
GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity 1.33% (1/75) 7.89 0.004228 0.01993
GO:0006790 sulfur compound metabolic process 2.67% (2/75) 4.8 0.002302 0.020715
GO:0051287 NAD binding 2.67% (2/75) 4.3 0.004583 0.021101
GO:0033014 tetrapyrrole biosynthetic process 2.67% (2/75) 4.64 0.002878 0.024778
GO:0009987 cellular process 24.0% (18/75) 0.91 0.005677 0.025548
GO:0006807 nitrogen compound metabolic process 18.67% (14/75) 1.04 0.0071 0.031238
GO:0033013 tetrapyrrole metabolic process 2.67% (2/75) 4.43 0.003856 0.031815
GO:0044237 cellular metabolic process 18.67% (14/75) 1.0 0.009068 0.039031
GO:0044281 small molecule metabolic process 6.67% (5/75) 1.96 0.009416 0.039666
GO:0008168 methyltransferase activity 4.0% (3/75) 2.76 0.009994 0.040383
GO:0008152 metabolic process 21.33% (16/75) 0.9 0.009913 0.040892
GO:0071704 organic substance metabolic process 20.0% (15/75) 0.93 0.010405 0.041202
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 2.67% (2/75) 3.64 0.011236 0.04362
GO:0015689 molybdate ion transport 1.33% (1/75) 6.3 0.01263 0.043871
GO:0015098 molybdate ion transmembrane transporter activity 1.33% (1/75) 6.3 0.01263 0.043871
GO:0006081 cellular aldehyde metabolic process 1.33% (1/75) 6.3 0.01263 0.043871
GO:0000096 sulfur amino acid metabolic process 1.33% (1/75) 6.3 0.01263 0.043871
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 2.67% (2/75) 3.6 0.011811 0.044972
GO:0016741 transferase activity, transferring one-carbon groups 4.0% (3/75) 2.65 0.012186 0.045527
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_176 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_81 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_20 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_23 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_26 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_31 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_53 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_72 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_97 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_101 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_128 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_131 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_140 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_147 0.054 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_159 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_164 0.045 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_172 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_177 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_1 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_84 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_170 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_37 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_71 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_136 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_57 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_105 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_194 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_246 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_119 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_281 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_288 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_329 0.025 Archaeplastida Compare
Sequences (75) (download table)

InterPro Domains

GO Terms

Family Terms