Coexpression cluster: Cluster_92 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044248 cellular catabolic process 3.39% (2/59) 3.91 0.00782 0.044313
GO:0051499 D-aminoacyl-tRNA deacylase activity 1.69% (1/59) 7.23 0.00664 0.044348
GO:0030490 maturation of SSU-rRNA 1.69% (1/59) 7.23 0.00664 0.044348
GO:0043085 positive regulation of catalytic activity 1.69% (1/59) 7.23 0.00664 0.044348
GO:0044093 positive regulation of molecular function 1.69% (1/59) 7.23 0.00664 0.044348
GO:0008541 proteasome regulatory particle, lid subcomplex 1.69% (1/59) 7.23 0.00664 0.044348
GO:0005672 transcription factor TFIIA complex 1.69% (1/59) 7.23 0.00664 0.044348
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.69% (1/59) 7.23 0.00664 0.044348
GO:0030688 preribosome, small subunit precursor 1.69% (1/59) 7.23 0.00664 0.044348
GO:0006518 peptide metabolic process 5.08% (3/59) 2.85 0.008331 0.044509
GO:0043604 amide biosynthetic process 5.08% (3/59) 2.86 0.00815 0.044823
GO:0003735 structural constituent of ribosome 5.08% (3/59) 2.91 0.007449 0.044936
GO:0043603 cellular amide metabolic process 5.08% (3/59) 2.83 0.008699 0.045189
GO:0043043 peptide biosynthetic process 5.08% (3/59) 2.89 0.007795 0.045551
GO:0005575 cellular_component 16.95% (10/59) 1.28 0.007326 0.045665
GO:0006412 translation 5.08% (3/59) 2.93 0.007113 0.045868
GO:0005198 structural molecule activity 5.08% (3/59) 2.81 0.009078 0.04588
GO:0019941 modification-dependent protein catabolic process 3.39% (2/59) 5.23 0.001266 0.047357
GO:0043632 modification-dependent macromolecule catabolic process 3.39% (2/59) 5.23 0.001266 0.047357
GO:0006511 ubiquitin-dependent protein catabolic process 3.39% (2/59) 5.23 0.001266 0.047357
GO:0005622 intracellular anatomical structure 6.78% (4/59) 2.12 0.013355 0.04897
GO:0006406 mRNA export from nucleus 1.69% (1/59) 6.23 0.013237 0.049508
GO:0006405 RNA export from nucleus 1.69% (1/59) 6.23 0.013237 0.049508
GO:0031625 ubiquitin protein ligase binding 1.69% (1/59) 6.23 0.013237 0.049508
GO:0051168 nuclear export 1.69% (1/59) 6.23 0.013237 0.049508
GO:0044389 ubiquitin-like protein ligase binding 1.69% (1/59) 6.23 0.013237 0.049508
GO:0050657 nucleic acid transport 1.69% (1/59) 6.23 0.013237 0.049508
GO:0050658 RNA transport 1.69% (1/59) 6.23 0.013237 0.049508
GO:0051236 establishment of RNA localization 1.69% (1/59) 6.23 0.013237 0.049508
GO:0051028 mRNA transport 1.69% (1/59) 6.23 0.013237 0.049508
GO:0043226 organelle 6.78% (4/59) 2.23 0.010362 0.049683
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_63 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_137 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_54 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_111 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_246 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_260 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_74 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_97 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_277 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_294 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_325 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_342 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_10 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_44 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_64 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_163 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_208 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_310 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_155 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_383 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_128 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_172 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_7 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_127 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_239 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_74 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_304 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_334 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_341 0.024 Archaeplastida Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms