Coexpression cluster: Cluster_18 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 10.96% (25/228) 4.18 0.0 0.0
GO:0006260 DNA replication 5.7% (13/228) 5.59 0.0 0.0
GO:0090304 nucleic acid metabolic process 12.28% (28/228) 2.78 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 11.4% (26/228) 2.94 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 12.72% (29/228) 2.14 0.0 0.0
GO:0046483 heterocycle metabolic process 13.16% (30/228) 2.07 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 13.16% (30/228) 2.08 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 13.16% (30/228) 2.04 0.0 0.0
GO:0003677 DNA binding 8.77% (20/228) 2.52 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 13.16% (30/228) 1.79 0.0 0.0
GO:0003887 DNA-directed DNA polymerase activity 2.19% (5/228) 5.6 0.0 0.0
GO:0006270 DNA replication initiation 2.19% (5/228) 5.43 0.0 1e-06
GO:0034061 DNA polymerase activity 2.19% (5/228) 5.28 0.0 1e-06
GO:0140097 catalytic activity, acting on DNA 3.07% (7/228) 3.84 0.0 7e-06
GO:0005524 ATP binding 12.28% (28/228) 1.42 2e-06 3e-05
GO:0032559 adenyl ribonucleotide binding 12.28% (28/228) 1.41 2e-06 3.1e-05
GO:0015631 tubulin binding 3.07% (7/228) 3.53 2e-06 3.1e-05
GO:0008092 cytoskeletal protein binding 3.07% (7/228) 3.39 4e-06 5.2e-05
GO:0030554 adenyl nucleotide binding 12.28% (28/228) 1.33 6e-06 7e-05
GO:0006281 DNA repair 3.07% (7/228) 3.31 6e-06 7.2e-05
GO:0000808 origin recognition complex 1.32% (3/228) 5.87 8e-06 8.5e-05
GO:0051716 cellular response to stimulus 3.07% (7/228) 3.21 1e-05 9.2e-05
GO:0006974 cellular response to DNA damage stimulus 3.07% (7/228) 3.21 1e-05 9.2e-05
GO:0033554 cellular response to stress 3.07% (7/228) 3.21 1e-05 9.2e-05
GO:0016779 nucleotidyltransferase activity 3.07% (7/228) 3.18 1.1e-05 9.9e-05
GO:0000166 nucleotide binding 13.16% (30/228) 1.19 2.1e-05 0.000168
GO:1901265 nucleoside phosphate binding 13.16% (30/228) 1.19 2.1e-05 0.000168
GO:0003676 nucleic acid binding 9.65% (22/228) 1.44 2.3e-05 0.000169
GO:0035639 purine ribonucleoside triphosphate binding 12.28% (28/228) 1.24 2.3e-05 0.000174
GO:0032555 purine ribonucleotide binding 12.28% (28/228) 1.23 2.4e-05 0.000176
GO:0032553 ribonucleotide binding 12.28% (28/228) 1.21 3e-05 0.00021
GO:0097367 carbohydrate derivative binding 12.28% (28/228) 1.21 3.3e-05 0.000224
GO:0140640 catalytic activity, acting on a nucleic acid 4.39% (10/228) 2.28 4.3e-05 0.000272
GO:0006950 response to stress 3.07% (7/228) 2.9 4.2e-05 0.000274
GO:0036094 small molecule binding 13.16% (30/228) 1.12 5.3e-05 0.000324
GO:0017076 purine nucleotide binding 12.28% (28/228) 1.16 5.5e-05 0.000332
GO:0050896 response to stimulus 3.07% (7/228) 2.8 6.4e-05 0.000375
GO:0051276 chromosome organization 1.75% (4/228) 3.89 0.000134 0.000742
GO:0140657 ATP-dependent activity 3.07% (7/228) 2.63 0.000139 0.000749
GO:0043168 anion binding 12.28% (28/228) 1.09 0.000132 0.000752
GO:0005664 nuclear origin of replication recognition complex 0.88% (2/228) 6.28 0.000164 0.000772
GO:0003896 DNA primase activity 0.88% (2/228) 6.28 0.000164 0.000772
GO:0006269 DNA replication, synthesis of RNA primer 0.88% (2/228) 6.28 0.000164 0.000772
GO:1901363 heterocyclic compound binding 17.11% (39/228) 0.87 0.000155 0.00078
GO:0097159 organic cyclic compound binding 17.11% (39/228) 0.87 0.000155 0.00078
GO:0008017 microtubule binding 2.19% (5/228) 3.28 0.000153 0.000806
GO:0003777 microtubule motor activity 2.19% (5/228) 3.18 0.000217 0.000997
GO:0007018 microtubule-based movement 2.19% (5/228) 3.14 0.000242 0.00109
GO:0005634 nucleus 3.07% (7/228) 2.45 0.000307 0.001353
GO:0003774 cytoskeletal motor activity 2.19% (5/228) 3.05 0.000332 0.001432
GO:0043170 macromolecule metabolic process 14.04% (32/228) 0.91 0.000419 0.001776
GO:0007017 microtubule-based process 2.19% (5/228) 2.93 0.000487 0.002023
GO:1903047 mitotic cell cycle process 0.88% (2/228) 5.28 0.00097 0.003953
GO:0043231 intracellular membrane-bounded organelle 3.07% (7/228) 2.14 0.001114 0.004456
GO:0043227 membrane-bounded organelle 3.07% (7/228) 2.12 0.001168 0.004585
GO:0006996 organelle organization 1.75% (4/228) 3.03 0.001392 0.005369
GO:0043015 gamma-tubulin binding 0.88% (2/228) 4.96 0.001603 0.006074
GO:0044237 cellular metabolic process 14.47% (33/228) 0.77 0.001663 0.006194
GO:0043167 ion binding 13.6% (31/228) 0.8 0.001758 0.006436
GO:0009987 cellular process 18.42% (42/228) 0.64 0.002285 0.008226
GO:0006807 nitrogen compound metabolic process 14.91% (34/228) 0.71 0.002836 0.010044
GO:0022402 cell cycle process 0.88% (2/228) 4.11 0.005578 0.019125
GO:0030983 mismatched DNA binding 0.88% (2/228) 4.11 0.005578 0.019125
GO:0016043 cellular component organization 2.19% (5/228) 2.11 0.006088 0.020232
GO:0005488 binding 21.93% (50/228) 0.5 0.006 0.020249
GO:0006298 mismatch repair 0.88% (2/228) 3.82 0.008379 0.027422
GO:0071840 cellular component organization or biogenesis 2.19% (5/228) 1.93 0.010202 0.03289
GO:0007076 mitotic chromosome condensation 0.44% (1/228) 6.28 0.012852 0.038027
GO:0046654 tetrahydrofolate biosynthetic process 0.44% (1/228) 6.28 0.012852 0.038027
GO:0046653 tetrahydrofolate metabolic process 0.44% (1/228) 6.28 0.012852 0.038027
GO:0004146 dihydrofolate reductase activity 0.44% (1/228) 6.28 0.012852 0.038027
GO:0032299 ribonuclease H2 complex 0.44% (1/228) 6.28 0.012852 0.038027
GO:0000796 condensin complex 0.44% (1/228) 6.28 0.012852 0.038027
GO:0140513 nuclear protein-containing complex 1.32% (3/228) 2.54 0.01459 0.042588
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Chlamydomonas reinhardtii HCCA Cluster_2 0.009 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_6 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_9 0.005 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_16 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_21 0.005 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_27 0.006 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_29 0.01 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.008 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_39 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_41 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_45 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_52 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_53 0.006 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_55 0.006 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_57 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_59 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_65 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_66 0.006 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_70 0.005 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_75 0.005 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_78 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_80 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.008 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_99 0.006 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_102 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_106 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_107 0.013 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_117 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.005 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_123 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_130 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_131 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_136 0.01 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_138 0.006 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_140 0.008 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_141 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_144 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_151 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_152 0.01 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_153 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_155 0.003 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_157 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_158 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_165 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_166 0.007 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_167 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_169 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_170 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_173 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_175 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_176 0.004 OrthoFinder output from all 39 species Compare
Chlamydomonas reinhardtii HCCA Cluster_177 0.004 OrthoFinder output from all 39 species Compare
Cyanophora paradoxa HCCA Cluster_19 0.005 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_75 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_193 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_238 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_274 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_359 0.004 OrthoFinder output from all 39 species Compare
Picea abies HCCA Cluster_492 0.004 OrthoFinder output from all 39 species Compare
Lindsaea ensifolia HCCA Cluster_436 0.004 OrthoFinder output from all 39 species Compare
Lindsaea ensifolia HCCA Cluster_493 0.004 OrthoFinder output from all 39 species Compare
Nephrolepis biserrata HCCA Cluster_404 0.003 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_418 0.004 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_551 0.004 OrthoFinder output from all 39 species Compare
Pyrrosia piloselloides HCCA Cluster_255 0.004 OrthoFinder output from all 39 species Compare
Pyrrosia piloselloides HCCA Cluster_661 0.004 OrthoFinder output from all 39 species Compare
Alsophila spinulosa HCCA Cluster_349 0.004 OrthoFinder output from all 39 species Compare
Azolla filiculoides HCCA Cluster_166 0.004 OrthoFinder output from all 39 species Compare
Azolla filiculoides HCCA Cluster_210 0.003 OrthoFinder output from all 39 species Compare
Salvinia cucullata HCCA Cluster_39 0.004 OrthoFinder output from all 39 species Compare
Sequences (228) (download table)

InterPro Domains

GO Terms

Family Terms