Coexpression cluster: Cluster_34 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 19.53% (33/169) 3.94 0.0 0.0
GO:0003735 structural constituent of ribosome 15.38% (26/169) 4.51 0.0 0.0
GO:0005198 structural molecule activity 15.38% (26/169) 4.4 0.0 0.0
GO:0006412 translation 14.79% (25/169) 4.48 0.0 0.0
GO:0043043 peptide biosynthetic process 14.79% (25/169) 4.43 0.0 0.0
GO:0043604 amide biosynthetic process 14.79% (25/169) 4.4 0.0 0.0
GO:0006518 peptide metabolic process 14.79% (25/169) 4.39 0.0 0.0
GO:0043603 cellular amide metabolic process 14.79% (25/169) 4.37 0.0 0.0
GO:0005840 ribosome 14.2% (24/169) 4.45 0.0 0.0
GO:0043228 non-membrane-bounded organelle 14.2% (24/169) 4.27 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 14.2% (24/169) 4.27 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 19.53% (33/169) 3.25 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 14.79% (25/169) 3.83 0.0 0.0
GO:0009059 macromolecule biosynthetic process 14.79% (25/169) 3.69 0.0 0.0
GO:0044249 cellular biosynthetic process 20.12% (34/169) 2.92 0.0 0.0
GO:1901576 organic substance biosynthetic process 20.12% (34/169) 2.86 0.0 0.0
GO:0009058 biosynthetic process 20.12% (34/169) 2.74 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 21.3% (36/169) 2.52 0.0 0.0
GO:0005622 intracellular anatomical structure 14.79% (25/169) 3.25 0.0 0.0
GO:0043229 intracellular organelle 14.2% (24/169) 3.3 0.0 0.0
GO:0043226 organelle 14.2% (24/169) 3.3 0.0 0.0
GO:0110165 cellular anatomical entity 20.71% (35/169) 1.95 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 21.89% (37/169) 1.69 0.0 0.0
GO:0033014 tetrapyrrole biosynthetic process 4.14% (7/169) 5.27 0.0 0.0
GO:0005575 cellular_component 21.89% (37/169) 1.65 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 4.14% (7/169) 5.06 0.0 0.0
GO:0044237 cellular metabolic process 24.85% (42/169) 1.41 0.0 0.0
GO:0006779 porphyrin-containing compound biosynthetic process 2.96% (5/169) 6.04 0.0 0.0
GO:0006778 porphyrin-containing compound metabolic process 2.96% (5/169) 5.71 0.0 0.0
GO:0009987 cellular process 28.99% (49/169) 1.18 0.0 0.0
GO:0003674 molecular_function 46.75% (79/169) 0.77 0.0 1e-06
GO:0044267 cellular protein metabolic process 15.38% (26/169) 1.66 0.0 2e-06
GO:0008152 metabolic process 25.44% (43/169) 1.15 0.0 3e-06
GO:0006807 nitrogen compound metabolic process 21.89% (37/169) 1.27 0.0 3e-06
GO:0008150 biological_process 31.36% (53/169) 0.96 1e-06 5e-06
GO:0071704 organic substance metabolic process 23.67% (40/169) 1.17 1e-06 5e-06
GO:0004853 uroporphyrinogen decarboxylase activity 1.78% (3/169) 6.71 1e-06 7e-06
GO:0016830 carbon-carbon lyase activity 2.96% (5/169) 4.51 2e-06 1.7e-05
GO:0019538 protein metabolic process 15.38% (26/169) 1.43 4e-06 2.8e-05
GO:0044260 cellular macromolecule metabolic process 15.38% (26/169) 1.39 6e-06 4.5e-05
GO:0003723 RNA binding 5.33% (9/169) 2.68 1.2e-05 8.4e-05
GO:0016831 carboxy-lyase activity 2.37% (4/169) 4.71 1.3e-05 9.3e-05
GO:0043170 macromolecule metabolic process 16.57% (28/169) 1.13 7e-05 0.000483
GO:0003747 translation release factor activity 1.18% (2/169) 6.13 0.000269 0.001763
GO:0008079 translation termination factor activity 1.18% (2/169) 6.13 0.000269 0.001763
GO:0019898 extrinsic component of membrane 1.78% (3/169) 4.49 0.000286 0.001835
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 1.78% (3/169) 4.39 0.000355 0.002229
GO:0015833 peptide transport 2.96% (5/169) 2.99 0.000413 0.002391
GO:0015031 protein transport 2.96% (5/169) 2.99 0.000413 0.002391
GO:0045184 establishment of protein localization 2.96% (5/169) 2.99 0.000413 0.002391
GO:0042886 amide transport 2.96% (5/169) 2.99 0.000413 0.002391
GO:0008104 protein localization 2.96% (5/169) 2.97 0.000443 0.002467
GO:0033036 macromolecule localization 2.96% (5/169) 2.97 0.000443 0.002467
GO:0022411 cellular component disassembly 1.18% (2/169) 5.71 0.000535 0.002719
GO:0006415 translational termination 1.18% (2/169) 5.71 0.000535 0.002719
GO:0043624 cellular protein complex disassembly 1.18% (2/169) 5.71 0.000535 0.002719
GO:0032984 protein-containing complex disassembly 1.18% (2/169) 5.71 0.000535 0.002719
GO:0044238 primary metabolic process 18.34% (31/169) 0.89 0.000569 0.002846
GO:0009654 photosystem II oxygen evolving complex 1.78% (3/169) 4.21 0.000523 0.002859
GO:0009523 photosystem II 1.78% (3/169) 4.05 0.000736 0.003616
GO:0016829 lyase activity 4.14% (7/169) 2.15 0.001073 0.005189
GO:1990204 oxidoreductase complex 1.78% (3/169) 3.84 0.001145 0.005446
GO:0071702 organic substance transport 2.96% (5/169) 2.66 0.001179 0.005522
GO:0019438 aromatic compound biosynthetic process 4.73% (8/169) 1.84 0.001841 0.007338
GO:0090150 establishment of protein localization to membrane 1.18% (2/169) 4.91 0.001836 0.007419
GO:0006612 protein targeting to membrane 1.18% (2/169) 4.91 0.001836 0.007419
GO:0006613 cotranslational protein targeting to membrane 1.18% (2/169) 4.91 0.001836 0.007419
GO:0045047 protein targeting to ER 1.18% (2/169) 4.91 0.001836 0.007419
GO:0070972 protein localization to endoplasmic reticulum 1.18% (2/169) 4.91 0.001836 0.007419
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.18% (2/169) 4.91 0.001836 0.007419
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.18% (2/169) 4.91 0.001836 0.007419
GO:0072657 protein localization to membrane 1.18% (2/169) 4.91 0.001836 0.007419
GO:0019843 rRNA binding 1.18% (2/169) 4.91 0.001836 0.007419
GO:0071705 nitrogen compound transport 2.96% (5/169) 2.56 0.001611 0.007423
GO:0018130 heterocycle biosynthetic process 4.73% (8/169) 1.8 0.002212 0.008699
GO:0009521 photosystem 1.78% (3/169) 3.49 0.002335 0.009064
GO:0006605 protein targeting 1.18% (2/169) 4.71 0.002432 0.0092
GO:0000049 tRNA binding 1.18% (2/169) 4.71 0.002432 0.0092
GO:0015979 photosynthesis 1.78% (3/169) 3.39 0.002854 0.010657
GO:1901362 organic cyclic compound biosynthetic process 4.73% (8/169) 1.74 0.002911 0.010733
GO:0033365 protein localization to organelle 1.18% (2/169) 4.39 0.003861 0.013889
GO:0072594 establishment of protein localization to organelle 1.18% (2/169) 4.39 0.003861 0.013889
GO:0006820 anion transport 2.96% (5/169) 2.22 0.004539 0.016133
GO:0070727 cellular macromolecule localization 1.18% (2/169) 4.25 0.004689 0.016274
GO:0034613 cellular protein localization 1.18% (2/169) 4.25 0.004689 0.016274
GO:0043933 protein-containing complex subunit organization 1.78% (3/169) 3.09 0.005203 0.017846
GO:0004329 formate-tetrahydrofolate ligase activity 0.59% (1/169) 6.71 0.009526 0.030545
GO:0004655 porphobilinogen synthase activity 0.59% (1/169) 6.71 0.009526 0.030545
GO:0015995 chlorophyll biosynthetic process 0.59% (1/169) 6.71 0.009526 0.030545
GO:0015994 chlorophyll metabolic process 0.59% (1/169) 6.71 0.009526 0.030545
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 0.59% (1/169) 6.71 0.009526 0.030545
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 0.59% (1/169) 6.71 0.009526 0.030545
GO:0016836 hydro-lyase activity 1.18% (2/169) 3.71 0.009916 0.031455
GO:0016835 carbon-oxygen lyase activity 1.18% (2/169) 3.54 0.012487 0.039188
GO:0006725 cellular aromatic compound metabolic process 6.51% (11/169) 1.12 0.013124 0.040752
GO:0046483 heterocycle metabolic process 6.51% (11/169) 1.11 0.013635 0.0419
GO:1901360 organic cyclic compound metabolic process 6.51% (11/169) 1.08 0.016029 0.048747
GO:0004109 coproporphyrinogen oxidase activity 0.59% (1/169) 5.71 0.018962 0.049502
GO:0034312 diol biosynthetic process 0.59% (1/169) 5.71 0.018962 0.049502
GO:0004751 ribose-5-phosphate isomerase activity 0.59% (1/169) 5.71 0.018962 0.049502
GO:0006729 tetrahydrobiopterin biosynthetic process 0.59% (1/169) 5.71 0.018962 0.049502
GO:0034311 diol metabolic process 0.59% (1/169) 5.71 0.018962 0.049502
GO:0009052 pentose-phosphate shunt, non-oxidative branch 0.59% (1/169) 5.71 0.018962 0.049502
GO:0046146 tetrahydrobiopterin metabolic process 0.59% (1/169) 5.71 0.018962 0.049502
GO:0070567 cytidylyltransferase activity 0.59% (1/169) 5.71 0.018962 0.049502
GO:0004418 hydroxymethylbilane synthase activity 0.59% (1/169) 5.71 0.018962 0.049502
GO:0004425 indole-3-glycerol-phosphate synthase activity 0.59% (1/169) 5.71 0.018962 0.049502
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 0.59% (1/169) 5.71 0.018962 0.049502
GO:0008135 translation factor activity, RNA binding 1.18% (2/169) 3.32 0.016822 0.049626
GO:0045182 translation regulator activity 1.18% (2/169) 3.32 0.016822 0.049626
GO:0090079 translation regulator activity, nucleic acid binding 1.18% (2/169) 3.32 0.016822 0.049626
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_16 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_42 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.108 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_121 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_125 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_170 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_184 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_221 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_24 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.073 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_116 0.095 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_130 0.141 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_142 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.063 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_223 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_231 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_57 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_38 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_63 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_76 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_86 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_126 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_142 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_166 0.043 Archaeplastida Compare
Gingko biloba HCCA Cluster_64 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_81 0.076 Archaeplastida Compare
Gingko biloba HCCA Cluster_238 0.114 Archaeplastida Compare
Gingko biloba HCCA Cluster_300 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_7 0.049 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_11 0.041 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_17 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_35 0.198 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_37 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_59 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_92 0.067 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_143 0.068 Archaeplastida Compare
Oryza sativa HCCA Cluster_26 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_47 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.136 Archaeplastida Compare
Oryza sativa HCCA Cluster_169 0.054 Archaeplastida Compare
Oryza sativa HCCA Cluster_217 0.084 Archaeplastida Compare
Oryza sativa HCCA Cluster_287 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_372 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_2 0.153 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.107 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_83 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_98 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_149 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.07 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_209 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_223 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.063 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_282 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_307 0.054 Archaeplastida Compare
Picea abies HCCA Cluster_4 0.07 Archaeplastida Compare
Picea abies HCCA Cluster_230 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_250 0.037 Archaeplastida Compare
Picea abies HCCA Cluster_322 0.068 Archaeplastida Compare
Picea abies HCCA Cluster_338 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_342 0.07 Archaeplastida Compare
Picea abies HCCA Cluster_417 0.039 Archaeplastida Compare
Picea abies HCCA Cluster_447 0.062 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.056 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_67 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_70 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_114 0.052 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_13 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.087 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_133 0.074 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_135 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_148 0.108 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_170 0.088 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_176 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_215 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_13 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.085 Archaeplastida Compare
Vitis vinifera HCCA Cluster_61 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_149 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_158 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_168 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_179 0.134 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_14 0.133 Archaeplastida Compare
Zea mays HCCA Cluster_49 0.065 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_164 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_273 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_320 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_367 0.024 Archaeplastida Compare
Sequences (169) (download table)

InterPro Domains

GO Terms

Family Terms