Coexpression cluster: Cluster_42 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006260 DNA replication 6.48% (7/108) 5.77 0.0 0.0
GO:0015631 tubulin binding 5.56% (6/108) 4.39 0.0 1.9e-05
GO:0034061 DNA polymerase activity 3.7% (4/108) 6.04 0.0 1.9e-05
GO:0000808 origin recognition complex 2.78% (3/108) 6.94 1e-06 2.6e-05
GO:0008092 cytoskeletal protein binding 5.56% (6/108) 4.24 1e-06 2.6e-05
GO:0030554 adenyl nucleotide binding 15.74% (17/108) 1.76 9e-06 0.000173
GO:0032559 adenyl ribonucleotide binding 15.74% (17/108) 1.77 9e-06 0.000189
GO:0003887 DNA-directed DNA polymerase activity 2.78% (3/108) 5.94 1.2e-05 0.000196
GO:0005524 ATP binding 15.74% (17/108) 1.77 8e-06 0.000206
GO:0030983 mismatched DNA binding 2.78% (3/108) 5.77 1.8e-05 0.000264
GO:0006281 DNA repair 4.63% (5/108) 3.9 2.1e-05 0.000278
GO:0017076 purine nucleotide binding 15.74% (17/108) 1.58 4.6e-05 0.000308
GO:0033554 cellular response to stress 4.63% (5/108) 3.8 2.9e-05 0.000308
GO:0006974 cellular response to DNA damage stimulus 4.63% (5/108) 3.8 2.9e-05 0.000308
GO:0051716 cellular response to stimulus 4.63% (5/108) 3.8 2.9e-05 0.000308
GO:0032555 purine ribonucleotide binding 15.74% (17/108) 1.59 4.4e-05 0.00031
GO:0003677 DNA binding 8.33% (9/108) 2.44 4.4e-05 0.000323
GO:0032553 ribonucleotide binding 15.74% (17/108) 1.57 5.1e-05 0.000328
GO:0097367 carbohydrate derivative binding 15.74% (17/108) 1.56 5.5e-05 0.000336
GO:1901265 nucleoside phosphate binding 16.67% (18/108) 1.53 4.4e-05 0.000337
GO:0000166 nucleotide binding 16.67% (18/108) 1.53 4.4e-05 0.000337
GO:0005664 nuclear origin of replication recognition complex 1.85% (2/108) 7.36 3.7e-05 0.000337
GO:0006298 mismatch repair 2.78% (3/108) 5.49 3.5e-05 0.000342
GO:0035639 purine ribonucleoside triphosphate binding 15.74% (17/108) 1.59 4.2e-05 0.000363
GO:0006950 response to stress 4.63% (5/108) 3.49 8.2e-05 0.000448
GO:0140097 catalytic activity, acting on DNA 3.7% (4/108) 4.11 8.2e-05 0.000462
GO:0036094 small molecule binding 16.67% (18/108) 1.46 8.1e-05 0.000479
GO:0008017 microtubule binding 3.7% (4/108) 4.04 0.0001 0.000526
GO:0050896 response to stimulus 4.63% (5/108) 3.4 0.000113 0.000573
GO:0034645 cellular macromolecule biosynthetic process 6.48% (7/108) 2.64 0.000138 0.000652
GO:0003777 microtubule motor activity 3.7% (4/108) 3.93 0.000133 0.000654
GO:0043168 anion binding 15.74% (17/108) 1.45 0.000148 0.000657
GO:0007018 microtubule-based movement 3.7% (4/108) 3.9 0.000146 0.000671
GO:0006928 movement of cell or subcellular component 3.7% (4/108) 3.87 0.00016 0.00069
GO:0003690 double-stranded DNA binding 2.78% (3/108) 4.77 0.000167 0.000703
GO:0003774 motor activity 3.7% (4/108) 3.81 0.000189 0.000773
GO:0006259 DNA metabolic process 4.63% (5/108) 3.17 0.000234 0.000929
GO:0009059 macromolecule biosynthetic process 6.48% (7/108) 2.5 0.000243 0.000941
GO:0007017 microtubule-based process 3.7% (4/108) 3.69 0.00026 0.000982
GO:0043015 gamma-tubulin binding 1.85% (2/108) 6.04 0.000363 0.00127
GO:1901363 heterocyclic compound binding 20.37% (22/108) 1.12 0.000363 0.0013
GO:0097159 organic cyclic compound binding 20.37% (22/108) 1.12 0.000363 0.0013
GO:0016779 nucleotidyltransferase activity 3.7% (4/108) 3.45 0.000487 0.001666
GO:0044260 cellular macromolecule metabolic process 13.89% (15/108) 1.24 0.001594 0.005326
GO:0005488 binding 26.85% (29/108) 0.79 0.001656 0.005411
GO:0043167 ion binding 16.67% (18/108) 1.09 0.001721 0.0055
GO:0005634 nucleus 3.7% (4/108) 2.72 0.003254 0.010177
GO:0003676 nucleic acid binding 9.26% (10/108) 1.38 0.005181 0.015867
GO:0032299 ribonuclease H2 complex 0.93% (1/108) 7.36 0.006088 0.017898
GO:0003964 RNA-directed DNA polymerase activity 0.93% (1/108) 7.36 0.006088 0.017898
GO:0043227 membrane-bounded organelle 3.7% (4/108) 2.41 0.006968 0.019697
GO:0043231 intracellular membrane-bounded organelle 3.7% (4/108) 2.41 0.006968 0.019697
GO:0043170 macromolecule metabolic process 14.81% (16/108) 0.97 0.007286 0.020208
GO:0017111 nucleoside-triphosphatase activity 4.63% (5/108) 2.02 0.007883 0.02146
GO:0016462 pyrophosphatase activity 4.63% (5/108) 1.96 0.009413 0.02516
GO:0016817 hydrolase activity, acting on acid anhydrides 4.63% (5/108) 1.94 0.009966 0.025259
GO:0090304 nucleic acid metabolic process 5.56% (6/108) 1.72 0.009947 0.025653
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.63% (5/108) 1.95 0.009779 0.025671
GO:0031390 Ctf18 RFC-like complex 0.93% (1/108) 6.36 0.012138 0.030243
GO:0005515 protein binding 9.26% (10/108) 1.14 0.015398 0.037725
GO:0007062 sister chromatid cohesion 0.93% (1/108) 5.77 0.018153 0.04304
GO:0007064 mitotic sister chromatid cohesion 0.93% (1/108) 5.77 0.018153 0.04304
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_10 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_145 0.058 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_43 0.039 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_256 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_5 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_6 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_41 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_106 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_149 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_173 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_52 0.058 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_74 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_128 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_187 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_56 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.035 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_322 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_1 0.056 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_154 0.041 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_184 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_11 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_50 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_172 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_223 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_91 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_202 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_312 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_31 0.05 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_276 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_284 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_426 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_540 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_85 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_122 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_205 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_235 0.045 Archaeplastida Compare
Vitis vinifera HCCA Cluster_68 0.061 Archaeplastida Compare
Vitis vinifera HCCA Cluster_103 0.05 Archaeplastida Compare
Vitis vinifera HCCA Cluster_213 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_51 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_74 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_247 0.05 Archaeplastida Compare
Zea mays HCCA Cluster_351 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.019 Archaeplastida Compare
Sequences (108) (download table)

InterPro Domains

GO Terms

Family Terms