"probe","sequence_id","alias","description" "Zm00001d002104","Zm00001d002104","GRMZM2G022192","19.1 tetrapyrrole synthesis.glu-tRNA synthetase Amidase family protein" "Zm00001d002240","Zm00001d002240","GRMZM2G073743","20.2 stress.abiotic Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light. chloroplastic lipocalin (CHL)" "Zm00001d002362","Zm00001d002362","GRMZM2G068982","29.5.7 protein.degradation.metalloprotease Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C. methionine aminopeptidase 1B (MAP1C)" "Zm00001d003404","Zm00001d003404","GRMZM2G414537","35.2 not assigned.unknown unknown protein Has 98" "Zm00001d003589","Zm00001d003589","GRMZM2G086971","35.2 not assigned.unknown Thioredoxin family protein" "Zm00001d004977","Zm00001d004977","GRMZM2G424491","29.8 protein.assembly and cofactor ligation Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen. CcdA" "Zm00001d007639","Zm00001d007639","GRMZM2G302233","30.5 signalling.G-proteins embryo defective 2738 (emb2738)" "Zm00001d008612","Zm00001d008612","GRMZM2G010929","35.1 not assigned.no ontology Tetratricopeptide repeat (TPR)-like superfamily protein" "Zm00001d008625","Zm00001d008625","GRMZM2G110063","29.3.3 protein.targeting.chloroplast member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence. ALBINO 3 (ALB3)" "Zm00001d009596","Zm00001d009596","GRMZM2G158024","35.2 not assigned.unknown RNA bindingGTP binding" "Zm00001d010799","Zm00001d010799","GRMZM2G106917","35.2 not assigned.unknown unknown protein. & (chl4|525478 : 87.0) no description available (original description: no original description)'" "Zm00001d011069","Zm00001d011069","GRMZM2G047219","35.2 not assigned.unknown NAD(P)-binding Rossmann-fold superfamily protein" "Zm00001d012787","Zm00001d012787","No alias","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein" "Zm00001d012868","Zm00001d012868","GRMZM2G144273","16.1.4 secondary metabolism.isoprenoids.carotenoids FAD/NAD(P)-binding oxidoreductase family protein" "Zm00001d013013","Zm00001d013013","GRMZM2G043453","19.10 tetrapyrrole synthesis.magnesium chelatase Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal. ALBINA 1 (ALB1)" "Zm00001d013240","Zm00001d013240","GRMZM2G089696","35.2 not assigned.unknown" "Zm00001d013651","Zm00001d013651","GRMZM2G065194","26.22 misc.short chain dehydrogenase/reductase (SDR) Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II). NYC1-like (NOL)" "Zm00001d014899","Zm00001d014899","GRMZM2G112895","No description available" "Zm00001d015374","Zm00001d015374","GRMZM2G128012","35.2 not assigned.unknown unknown protein" "Zm00001d015999","Zm00001d015999","GRMZM2G418206","35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. proteinaceous RNase P 1 (PRORP1)" "Zm00001d018366","Zm00001d018366","GRMZM2G119691","29.2.3 protein.synthesis.initiation Translation initiation factor 3 protein" "Zm00001d019899","Zm00001d019899","GRMZM2G086935, GRMZM2G087041","26.23 misc.rhodanese Rhodanese/Cell cycle control phosphatase superfamily protein" "Zm00001d020220","Zm00001d020220","GRMZM2G022837","18.5.2.1 Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.isochorismate synthase Encodes a protein with isochorismate synthase activity involved in phylloquinone biosynthesis. Mutant studies of this gene's function suggest that its function is redundant with that of ICS1 (AT1G7410). isochorismate synthase 2 (ICS2)" "Zm00001d020437","Zm00001d020437","GRMZM2G418752","1.3.13 PS.calvin cycle.rubisco interacting Rubisco methyltransferase family protein" "Zm00001d020445","Zm00001d020445","GRMZM2G159160","29.5 protein.degradation CAAX amino terminal protease family protein" "Zm00001d021368","Zm00001d021368","GRMZM5G809292","35.1.27 not assigned.no ontology.tetratricopeptide repeat (TPR) Encodes a TPR protein with homology to Ycf37 from Synechocystis that is localized to the thylakoid membrane and is involved in photosystem I biogenesis. Tetratricopeptide repeat (TPR)-like superfamily protein" "Zm00001d021507","Zm00001d021507","GRMZM2G455085","29.1.22 protein.aa activation.asparagine-tRNA ligase Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. NS1" "Zm00001d021518","Zm00001d021518","GRMZM2G488458","No description available" "Zm00001d021715","Zm00001d021715","GRMZM2G472382","29.2.5 protein.synthesis.release Required for normal processing of polycistronic plastidial transcripts high chlorophyll fluorescent 109 (HCF109)" "Zm00001d023340","Zm00001d023340","GRMZM2G129804","No description available" "Zm00001d023431","Zm00001d023431","GRMZM2G113093","29.3.3 protein.targeting.chloroplast mutant has Yellow first leaves Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit (CPSRP54)" "Zm00001d024718","Zm00001d024718","GRMZM2G125977","35.2 not assigned.unknown unknown protein BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1) Has 30201" "Zm00001d024830","Zm00001d024830","GRMZM2G063592","29.5.5 protein.degradation.serine protease Encodes DegP2 protease (DEGP2) nuclear gene for chloroplast product. DEGP protease 2 (DEGP2)" "Zm00001d025819","Zm00001d025819","GRMZM2G099729","No description available" "Zm00001d025848","Zm00001d025848","GRMZM2G031721, GRMZM2G055178","27.2 RNA.transcription plastid transcriptionally active 5 (PTAC5)" "Zm00001d026700","Zm00001d026700","GRMZM5G813783","35.2 not assigned.unknown unknown protein" "Zm00001d027850","Zm00001d027850","GRMZM2G162800","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1) Has 745" "Zm00001d028915","Zm00001d028915","GRMZM2G008490, GRMZM2G329040, GRMZM2G703565","35.1 not assigned.no ontology haloacid dehalogenase-like hydrolase family protein" "Zm00001d031963","Zm00001d031963","GRMZM2G319357","29.4 protein.postranslational modification protein tyrosine phosphatasesprotein tyrosine phosphatases" "Zm00001d033366","Zm00001d033366","GRMZM2G025731","35.2 not assigned.unknown unknown protein" "Zm00001d033473","Zm00001d033473","GRMZM2G134398","33.99 development.unspecified antitermination NusB domain-containing protein" "Zm00001d033634","Zm00001d033634","GRMZM2G036505","35.2 not assigned.unknown unknown protein" "Zm00001d033873","Zm00001d033873","GRMZM2G061442","35.2 not assigned.unknown unknown protein" "Zm00001d034318","Zm00001d034318","GRMZM2G038494","30.5 signalling.G-proteins GTP-binding protein-related" "Zm00001d034699","Zm00001d034699","GRMZM2G156937","27.3.99 RNA.regulation of transcription.unclassified plastid transcriptionally active 13 (PTAC13)" "Zm00001d034932","Zm00001d034932","GRMZM2G377487","35.2 not assigned.unknown Rhodanese/Cell cycle control phosphatase superfamily protein" "Zm00001d035051","Zm00001d035051","GRMZM2G457699","31.2 cell.division The gene encodes a chloroplast ribosome recycling factor homologue. Analysis of mutants revealed its role in the chloroplast development and eary stages of embryo development. "ribosome recycling factor, chloroplast precursor" (RRF)" "Zm00001d035200","Zm00001d035200","GRMZM2G066426","18.5.2.4 Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.o-Succinyl-BenzoylCoa Synthetase Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal. acyl-activating enzyme 14 (AAE14)" "Zm00001d035515","Zm00001d035515","GRMZM2G050842","33.99 development.unspecified PIGMENT DEFECTIVE 149 (PDE149)" "Zm00001d037240","Zm00001d037240","GRMZM5G826194","21.2.1 redox.ascorbate and glutathione.ascorbate The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. dehydroascorbate reductase 1 (DHAR3)" "Zm00001d037775","Zm00001d037775","GRMZM2G076006","24.2 Biodegradation of Xenobiotics.lactoylglutathione lyase Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein" "Zm00001d037777","Zm00001d037777","GRMZM2G118587, GRMZM2G118597","35.1 not assigned.no ontology alpha/beta-Hydrolases superfamily protein" "Zm00001d037984","Zm00001d037984","GRMZM2G162672","No description available" "Zm00001d039029","Zm00001d039029","GRMZM2G154648","No description available" "Zm00001d039061","Zm00001d039061","GRMZM2G092475","35.2 not assigned.unknown Sodium Bile acid symporter family" "Zm00001d039852","Zm00001d039852","GRMZM5G839422","29.3.3 protein.targeting.chloroplast member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence. ALBINO 3 (ALB3)" "Zm00001d039900","Zm00001d039900","GRMZM2G044697","No description available" "Zm00001d039987","Zm00001d039987","GRMZM2G362949","No description available" "Zm00001d040855","Zm00001d040855","No alias","35.2 not assigned.unknown unknown protein" "Zm00001d040857","Zm00001d040857","GRMZM2G047919","35.2 not assigned.unknown unknown protein" "Zm00001d042044","Zm00001d042044","No alias","29.3.3 protein.targeting.chloroplast chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids. CPFTSY" "Zm00001d042533","Zm00001d042533","GRMZM2G109526","35.2 not assigned.unknown" "Zm00001d043182","Zm00001d043182","GRMZM5G859195","16.1.1.4 secondary metabolism.isoprenoids.non-mevalonate pathway.CMK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK)" "Zm00001d043201","Zm00001d043201","GRMZM2G002165","35.2 not assigned.unknown Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage. CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST)" "Zm00001d043508","Zm00001d043508","GRMZM2G177970","29.1 protein.aa activation ovule abortion 4 (OVA4)" "Zm00001d044920","Zm00001d044920","GRMZM2G080044, GRMZM5G898880","9.2.1.3 mitochondrial electron transport / ATP synthesis.NADH-DH.type II.mitochondrial NAD(P)H dehydrogenase C1 (NDC1)" "Zm00001d047581","Zm00001d047581","GRMZM5G862107","29.2.1.1.3.1.1 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1 ribosomal protein S1 (RPS1)" "Zm00001d049160","Zm00001d049160","GRMZM2G143392","27.3.85 RNA.regulation of transcription.sigma like plant Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light. RNApolymerase sigma subunit 2 (SIG2)" "Zm00001d049694","Zm00001d049694","GRMZM2G159250","31.2 cell.division The gene encodes a chloroplast ribosome recycling factor homologue. Analysis of mutants revealed its role in the chloroplast development and eary stages of embryo development. "ribosome recycling factor, chloroplast precursor" (RRF)" "Zm00001d050173","Zm00001d050173","GRMZM2G126128","35.2 not assigned.unknown unknown protein" "Zm00001d052556","Zm00001d052556","GRMZM2G127230","29.3.3 protein.targeting.chloroplast mutant has Yellow first leaves Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit (CPSRP54)" "Zm00001d053978","Zm00001d053978","GRMZM2G106053","35.2 not assigned.unknown alpha/beta-Hydrolases superfamily protein" "Zm00001d054079","Zm00001d054079","GRMZM2G384293","35.2 not assigned.unknown Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. NO ASSOCIATED 1 (NOA1)"